More than 300 homologs were found in PanDaTox collection
for query gene Franean1_0533 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  100 
 
 		 219 aa  424  1e-118  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  58.49 
 
 		 214 aa  219  3.9999999999999997e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  55.19 
 
 		 225 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.19 
 
 		 218 aa  204  6e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  56.07 
 
 		 225 aa  203  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.67 
 
 		 234 aa  201  7e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.18 
 
 		 226 aa  201  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  53.21 
 
 		 227 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  54.79 
 
 		 226 aa  199  3e-50  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.29 
 
 		 220 aa  198  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  53.77 
 
 		 221 aa  198  6e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  53.15 
 
 		 225 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.42 
 
 		 220 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.52 
 
 		 215 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.29 
 
 		 225 aa  195  5.000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  52.05 
 
 		 247 aa  195  5.000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  55.05 
 
 		 230 aa  194  7e-49  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.53 
 
 		 229 aa  194  8.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.47 
 
 		 224 aa  194  9e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  52.23 
 
 		 221 aa  194  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  48.9 
 
 		 228 aa  194  1e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  53.42 
 
 		 221 aa  193  2e-48  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.05 
 
 		 230 aa  193  2e-48  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.38 
 
 		 230 aa  193  2e-48  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  52.7 
 
 		 222 aa  193  2e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  54.05 
 
 		 227 aa  192  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  51.82 
 
 		 221 aa  192  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  51.57 
 
 		 226 aa  191  5e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.21 
 
 		 223 aa  192  5e-48  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.05 
 
 		 221 aa  191  6e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  52.97 
 
 		 226 aa  191  8e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  53.05 
 
 		 222 aa  190  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal  1 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  53.21 
 
 		 234 aa  190  1e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  50.47 
 
 		 217 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  50.68 
 
 		 213 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.58 
 
 		 219 aa  189  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.17 
 
 		 221 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  55.19 
 
 		 222 aa  189  4e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.7 
 
 		 225 aa  188  4e-47  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  51.64 
 
 		 219 aa  189  4e-47  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.04 
 
 		 226 aa  189  4e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50.47 
 
 		 215 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.45 
 
 		 230 aa  188  5e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  51.39 
 
 		 230 aa  188  5e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  51.14 
 
 		 228 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.62 
 
 		 236 aa  187  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.53 
 
 		 224 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  53 
 
 		 234 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50.23 
 
 		 230 aa  187  1e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.24 
 
 		 221 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  53.67 
 
 		 223 aa  186  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.53 
 
 		 218 aa  186  2e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.254077 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.3 
 
 		 224 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.67 
 
 		 225 aa  186  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52.11 
 
 		 219 aa  186  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.21 
 
 		 222 aa  186  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  52.58 
 
 		 226 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  51.87 
 
 		 219 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.17 
 
 		 218 aa  185  4e-46  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.64 
 
 		 220 aa  185  4e-46  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50.46 
 
 		 224 aa  185  4e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50.46 
 
 		 218 aa  185  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.56 
 
 		 220 aa  185  5e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  51.89 
 
 		 225 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.3 
 
 		 225 aa  185  6e-46  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  44.17 
 
 		 248 aa  184  7e-46  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  50.47 
 
 		 211 aa  184  8e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  50 
 
 		 228 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.52 
 
 		 224 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  52.36 
 
 		 218 aa  182  3e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.54 
 
 		 222 aa  182  3e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.17 
 
 		 229 aa  182  3e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  51.42 
 
 		 225 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50.93 
 
 		 223 aa  182  4.0000000000000006e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.4 
 
 		 244 aa  182  5.0000000000000004e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  48.87 
 
 		 231 aa  182  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.33 
 
 		 234 aa  181  6e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal  1 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  48.23 
 
 		 231 aa  181  6e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.176081 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  53.3 
 
 		 224 aa  181  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.15 
 
 		 239 aa  181  8.000000000000001e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  48.64 
 
 		 241 aa  181  8.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.53 
 
 		 225 aa  181  9.000000000000001e-45  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  51.09 
 
 		 227 aa  181  9.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.64 
 
 		 239 aa  181  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  46.58 
 
 		 244 aa  180  1e-44  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5719  two component transcriptional regulator, LuxR family  54.09 
 
 		 232 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  56.02 
 
 		 217 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  49.78 
 
 		 226 aa  179  2e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  51.18 
 
 		 213 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  46.06 
 
 		 250 aa  179  2.9999999999999997e-44  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  48.84 
 
 		 220 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  51.39 
 
 		 230 aa  179  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.54 
 
 		 228 aa  179  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  50 
 
 		 221 aa  178  5.999999999999999e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  52.11 
 
 		 215 aa  178  5.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  48.84 
 
 		 223 aa  178  5.999999999999999e-44  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal  1 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  47.91 
 
 		 230 aa  178  7e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  48.43 
 
 		 235 aa  177  1e-43  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  50 
 
 		 216 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal  1 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  49.55 
 
 		 242 aa  177  1e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
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