More than 300 homologs were found in PanDaTox collection
for query gene Ccel_0149 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011898  Ccel_0149  two component transcriptional regulator, AraC family  100 
 
 		 525 aa  1068    Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0147  two component transcriptional regulator, AraC family  29.98 
 
 		 525 aa  234  3e-60  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_2344  AraC family DNA-binding response regulator  28.79 
 
 		 507 aa  188  2e-46  Clostridium perfringens ATCC 13124  Bacteria  normal  0.627636  n/a   
 
 
-
 
NC_008262  CPR_2056  AraC family DNA-binding response regulator  28.22 
 
 		 507 aa  182  1e-44  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2550  two component transcriptional regulator, AraC family  25.78 
 
 		 502 aa  171  3e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_0314  two component transcriptional regulator, AraC family  29.53 
 
 		 494 aa  164  3e-39  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0995  two component transcriptional regulator, AraC family  26.64 
 
 		 542 aa  161  2e-38  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_2113  two component AraC family transcriptional regulator  23.96 
 
 		 548 aa  162  2e-38  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_2007  two component AraC family transcriptional regulator  26.74 
 
 		 529 aa  155  2e-36  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2113  two component transcriptional regulator, AraC family  25.27 
 
 		 538 aa  154  5.9999999999999996e-36  Clostridium cellulolyticum H10  Bacteria  normal  0.141697  n/a   
 
 
-
 
NC_012034  Athe_2055  two component transcriptional regulator, AraC family  25.77 
 
 		 519 aa  150  5e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1982  two component transcriptional regulator, AraC family  27.29 
 
 		 544 aa  149  1.0000000000000001e-34  Clostridium cellulolyticum H10  Bacteria  normal  0.184696  n/a   
 
 
-
 
NC_011898  Ccel_2452  two component transcriptional regulator, AraC family  25.09 
 
 		 509 aa  146  9e-34  Clostridium cellulolyticum H10  Bacteria  normal  0.0693402  n/a   
 
 
-
 
NC_010320  Teth514_1958  response regulator receiver protein  25.93 
 
 		 530 aa  143  9.999999999999999e-33  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000471781  n/a   
 
 
-
 
NC_011898  Ccel_1228  two component transcriptional regulator, AraC family  26.61 
 
 		 532 aa  135  1.9999999999999998e-30  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_2253  two component AraC family transcriptional regulator  25.56 
 
 		 532 aa  134  5e-30  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1583  two component AraC family transcriptional regulator  25 
 
 		 533 aa  130  8.000000000000001e-29  Clostridium phytofermentans ISDg  Bacteria  normal  0.160886  n/a   
 
 
-
 
NC_012793  GWCH70_3156  two component transcriptional regulator, AraC family  24.23 
 
 		 515 aa  122  1.9999999999999998e-26  Geobacillus sp. WCH70  Bacteria  normal  0.949308  n/a   
 
 
-
 
NC_013411  GYMC61_3305  two component transcriptional regulator, AraC family  23.66 
 
 		 513 aa  120  7e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_2123  two component AraC family transcriptional regulator  45.31 
 
 		 414 aa  118  1.9999999999999998e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.331776  n/a   
 
 
-
 
NC_010001  Cphy_0496  two component AraC family transcriptional regulator  25.09 
 
 		 543 aa  118  1.9999999999999998e-25  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1138  two component transcriptional regulator, AraC family  23.5 
 
 		 519 aa  116  1.0000000000000001e-24  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3211  two component AraC family transcriptional regulator  43.65 
 
 		 548 aa  113  7.000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0042226  n/a   
 
 
-
 
NC_012034  Athe_0853  two component transcriptional regulator, AraC family  43.55 
 
 		 509 aa  112  2.0000000000000002e-23  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0198  two component transcriptional regulator, AraC family  37.96 
 
 		 534 aa  110  5e-23  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0525  two component AraC family transcriptional regulator  23.38 
 
 		 522 aa  110  5e-23  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_2141  two component AraC family transcriptional regulator  40.8 
 
 		 260 aa  105  3e-21  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0944  two component transcriptional regulator, AraC family  21.27 
 
 		 539 aa  103  7e-21  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3282  two component AraC family transcriptional regulator  39.23 
 
 		 535 aa  102  2e-20  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0771  two component AraC family transcriptional regulator  47.79 
 
 		 355 aa  101  3e-20  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000862622  n/a   
 
 
-
 
NC_012034  Athe_0600  two component transcriptional regulator, AraC family  26.73 
 
 		 546 aa  100  5e-20  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0293  two component AraC family transcriptional regulator  38.89 
 
 		 532 aa  99.8  1e-19  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  40.87 
 
 		 365 aa  97.8  4e-19  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1722  two component AraC family transcriptional regulator  37.74 
 
 		 508 aa  97.4  6e-19  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0224  response regulator receiver protein  37.61 
 
 		 537 aa  96.3  1e-18  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1584  two component AraC family transcriptional regulator  40.65 
 
 		 259 aa  95.5  2e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4591  two component transcriptional regulator, AraC family  36.22 
 
 		 265 aa  95.9  2e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2373  two component transcriptional regulator, AraC family  40.52 
 
 		 252 aa  92  2e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1394  two component AraC family transcriptional regulator  39.84 
 
 		 523 aa  91.7  3e-17  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0042226  n/a   
 
 
-
 
NC_008262  CPR_0539  AraC family DNA-binding response regulator  22.22 
 
 		 529 aa  91.7  3e-17  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3887  two component AraC family transcriptional regulator  33.79 
 
 		 252 aa  92  3e-17  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1645  two component transcriptional regulator, AraC family  42.98 
 
 		 526 aa  90.1  9e-17  Clostridium cellulolyticum H10  Bacteria  normal  0.168722  n/a   
 
 
-
 
NC_010001  Cphy_3861  two component AraC family transcriptional regulator  36.75 
 
 		 259 aa  89.4  1e-16  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_19910  response regulator receiver protein  37.8 
 
 		 386 aa  88.6  3e-16  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  37.5 
 
 		 217 aa  87.4  6e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_008261  CPF_0555  AraC family DNA-binding response regulator  39.09 
 
 		 529 aa  85.9  0.000000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_1111  AraC family transcriptional regulator  40.83 
 
 		 506 aa  84.7  0.000000000000004  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0000128485  n/a   
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  32.82 
 
 		 1066 aa  82.4  0.00000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_009012  Cthe_1824  two component AraC family transcriptional regulator  39.6 
 
 		 362 aa  81.6  0.00000000000003  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000196685  n/a   
 
 
-
 
NC_011898  Ccel_3249  two component transcriptional regulator, AraC family  39.62 
 
 		 531 aa  81.3  0.00000000000004  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0704  LytTR family two component transcriptional regulator  31.06 
 
 		 276 aa  80.9  0.00000000000005  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.674394 
 
 
-
 
NC_010001  Cphy_0618  two component AraC family transcriptional regulator  32.28 
 
 		 258 aa  80.9  0.00000000000005  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.00000605397  n/a   
 
 
-
 
NC_002976  SERP2406  AraC family DNA-binding response regulator  36.75 
 
 		 251 aa  80.5  0.00000000000006  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  42.24 
 
 		 248 aa  80.5  0.00000000000007  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_5488  two-component response regulator AlgR  41.38 
 
 		 248 aa  80.1  0.00000000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  33.59 
 
 		 252 aa  80.1  0.00000000000008  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  36.36 
 
 		 248 aa  80.1  0.00000000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal  1 
 
 
-
 
NC_009632  SaurJH1_0213  response regulator receiver  35.9 
 
 		 252 aa  80.1  0.0000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0864  two component AraC family transcriptional regulator  33.05 
 
 		 503 aa  79.3  0.0000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  37.59 
 
 		 248 aa  79.7  0.0000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  36.84 
 
 		 243 aa  79.3  0.0000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_0207  response regulator receiver protein  35.9 
 
 		 252 aa  80.1  0.0000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  29.61 
 
 		 220 aa  79  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2718  two component transcriptional regulator, AraC family  37.39 
 
 		 259 aa  79.3  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  36.54 
 
 		 229 aa  78.6  0.0000000000003  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_009511  Swit_2974  LytTR family two component transcriptional regulator  35.71 
 
 		 266 aa  78.2  0.0000000000004  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.318128 
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  39.85 
 
 		 248 aa  77  0.0000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0063  response regulator receiver:LytTr DNA-binding region  38.35 
 
 		 248 aa  76.3  0.000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_0227  LytR/AlgR family transcriptional regulator  36.43 
 
 		 265 aa  76.3  0.000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.312706  n/a   
 
 
-
 
NC_007912  Sde_3668  two-component response regulator AlgR  36.29 
 
 		 243 aa  76.3  0.000000000001  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00827536  normal  0.334671 
 
 
-
 
NC_012560  Avin_47610  encystment and alginate biosynthesis response regulator; AlgR  37.59 
 
 		 251 aa  76.6  0.000000000001  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  34.11 
 
 		 243 aa  76.3  0.000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  hitchhiker  0.000000000586434 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  33.33 
 
 		 226 aa  76.3  0.000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009439  Pmen_2375  two component LuxR family transcriptional regulator  36.44 
 
 		 214 aa  76.3  0.000000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.405291  normal  0.0506876 
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  37.6 
 
 		 266 aa  75.5  0.000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  39.29 
 
 		 470 aa  75.9  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  34.19 
 
 		 216 aa  75.9  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  34.82 
 
 		 250 aa  75.5  0.000000000002  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.79 
 
 		 226 aa  75.5  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  36.94 
 
 		 472 aa  75.1  0.000000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2371  response regulator receiver protein  26.63 
 
 		 233 aa  75.1  0.000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_0937  transcriptional regulator, AraC family  34 
 
 		 291 aa  74.7  0.000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.440102  n/a   
 
 
-
 
NC_012560  Avin_25030  Response regulator GacA  36.21 
 
 		 209 aa  74.7  0.000000000004  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  37.17 
 
 		 220 aa  74.7  0.000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  29.01 
 
 		 207 aa  74.3  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  39.25 
 
 		 195 aa  74.3  0.000000000005  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  36.19 
 
 		 203 aa  73.9  0.000000000006  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_3024  DNA-binding response regulator GacA  37.38 
 
 		 214 aa  73.9  0.000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.26082  n/a   
 
 
-
 
NC_007963  Csal_2132  two component LuxR family transcriptional regulator  34.17 
 
 		 214 aa  74.3  0.000000000006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0449794  n/a   
 
 
-
 
NC_008553  Mthe_0064  response regulator receiver protein  34.45 
 
 		 119 aa  73.9  0.000000000006  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  35.56 
 
 		 470 aa  73.9  0.000000000007  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.78 
 
 		 221 aa  73.9  0.000000000007  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_0355  response regulator receiver protein  33.33 
 
 		 234 aa  73.9  0.000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  31.78 
 
 		 275 aa  73.6  0.000000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  36.19 
 
 		 232 aa  73.6  0.000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  36.75 
 
 		 241 aa  73.6  0.000000000008  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  30.33 
 
 		 228 aa  73.6  0.000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2467  two component transcriptional regulator, AraC family  29.44 
 
 		 251 aa  73.6  0.000000000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_4587  putative two-component response-regulatory protein YehT  37.39 
 
 		 241 aa  73.6  0.000000000009  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_2533  two component, sigma54 specific, transcriptional regulator, Fis family  35.85 
 
 		 483 aa  73.2  0.00000000001  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
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