| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0944 |
|---|
| Symbol | |
|---|
| ID | 7309780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1122427 |
|---|
| End bp | 1124046 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643607872 |
|---|
| Product | two component transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002505287 |
|---|
| Protein GI | 220928378 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAG CTATTATTGT TGATGATGAA GATTTGGTAC GCCAAGGTTT AAAAAAACAC
TTTGATTGGA GCGACCACAA TATTGAGATA GTTGCCGATC TTTCCGATGG CCAGAAGGCA
TTTCAGTATG TGAAGGACAA TCACGTTGAT TTGGTCCTTA CTGATGTCCT CATGCCTTAT
ATGGATGGAA TAACATTGGC AAAGAATTTA CGAGAGCTTT ATCCAGAGAT AAAGATAATA
TTTATTAGTG GTCATGATGA TGTAAGCTAC CTAAAAAATG CACTTAAAGT CGAGGCTGTG
GACTATATTC TTAAATCCAT CGATTTAGAC GAGCTTAAAG ATACTGTTAG CCGAGTGGTA
AATACTATGA ATACTGAGAA TCAGAGTAAA AAAACCATGG CTGATATGGA AAATCTATTA
AATCAGAGTT TTCCACTTTT ACAAGAGCGT TTTTTTATCA CAATGATCCG CGATGATTTC
GAAAATCCTG ATATAATGAA AGAACGTATA GCATTTTTGA ATATCCCACT CAATGATGAA
ATGTATTATT GTGTACTAGT AGTGCAAATA CAGCGTATTT ACAGCAAGTT TCATGTCTTA
ACGGAACGTG AGAGACAAAT TCTTTCCCTT CAGATACAAA ACGAATGTAC AGAAGTTGGT
AAACAGTATA GTGATACCAT TTGCTTTGAA AATAAACAAG GTGAATATGT TATGATATTG
TCCTTATTAG AAGATGAATA TGAAGAAACT CTCCTTGAAG TTTCCGAAAA TCTTGACAAG
CGTCTCAACG GTTATATGAA TTTGCCAGTA TCTATTGGTA TAAGTGACAG ATTTAAAGGG
CTTGAAAATA TAAAAGCATC TTATGAGAAT GCATCAAATT CCATAAGTAA ACGGTATTTA
CTTGATGACG AACTGACCAT TTCCGTTGAT AAATACGAAA TGGACGAAAG TCTCAAAGAA
TATAAGGAAA GAGCTAAAAA GAGTCTGCAA GAATGTTTAA GCTCTGGAAA TACCGAACAG
GTGTCTGAGG TACTCCGAGA GCTTTTCCAT ATAATAAGAG AAAAATTTCC AGATGATGAA
GAGCAGAATC TGATGATTTT TTTACTACTA CTCCCAACAC GCATAGTAAC TGATATTAAA
ATAAATAAAA AAAGTGATTA TTCCAACCAG CGAATGATTT TAGAGAAATT TCTGTGCTGT
GCGGATTTTG AAGAACAATG CCTTCTGATT CAAAAGCTCT ATTTTGAGGT GGCAACCCTT
ATGAGCAGCA TGAGCAAAAC ATATTCCCAT ACAATCATCA ATCAGGTGCG AAAGACTATT
GAGGAACGCT TTAAGGAACA GATATCAATA AGTACATTAG CAAGGGATGT TTACTTAACA
CCCACATATT TATGCGTTTT GTTTAAACAA GTTACCGGAA CTACAATAAA TGATTATTTA
ACTCTGACTC GACTTGAGAA AGCAAAGAAG CTTTTATCAG ATCCGTACAT AAAACTGTAT
GATGTATGTT ATGAGGTTGG CTATTTATCA CCAAGCTATT TTTCCCGTTT ATTTAAGAAA
TACACAGGAA TCTCGCCTAG CGAATACAGG AATGTTGCAA TAGCATCTTC CGAGCAATAA
|
|---|
| Protein sequence | MYKAIIVDDE DLVRQGLKKH FDWSDHNIEI VADLSDGQKA FQYVKDNHVD LVLTDVLMPY
MDGITLAKNL RELYPEIKII FISGHDDVSY LKNALKVEAV DYILKSIDLD ELKDTVSRVV
NTMNTENQSK KTMADMENLL NQSFPLLQER FFITMIRDDF ENPDIMKERI AFLNIPLNDE
MYYCVLVVQI QRIYSKFHVL TERERQILSL QIQNECTEVG KQYSDTICFE NKQGEYVMIL
SLLEDEYEET LLEVSENLDK RLNGYMNLPV SIGISDRFKG LENIKASYEN ASNSISKRYL
LDDELTISVD KYEMDESLKE YKERAKKSLQ ECLSSGNTEQ VSEVLRELFH IIREKFPDDE
EQNLMIFLLL LPTRIVTDIK INKKSDYSNQ RMILEKFLCC ADFEEQCLLI QKLYFEVATL
MSSMSKTYSH TIINQVRKTI EERFKEQISI STLARDVYLT PTYLCVLFKQ VTGTTINDYL
TLTRLEKAKK LLSDPYIKLY DVCYEVGYLS PSYFSRLFKK YTGISPSEYR NVAIASSEQ
|
|---|
| |