| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1394 |
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| Symbol | |
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| ID | 5742344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1734977 |
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| End bp | 1736548 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641292497 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_001558508 |
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| Protein GI | 160879540 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0042226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATG CTGTATTAGT AGATGATGAT ATTGAAATGC TGGAAATGTT ATCGCACCTT
ATCGATTGGC AAACCTACGG TTTTTCCATA TCGGGAAAGT ATAATAATGG TGAAAATGCA
TTAAAAAGTA TAGGTGAGGA GAAAGTAGAT CTATTAGTTA CAGATATTAC GATGCCAGCT
ATGGATGGTT TTGAACTAGC GAGAAATCTA AGGAAAATTA ATCCGGAAAT GAATGTCATA
TTTCTTACTT GTCATGAGGA TTTTTCTTAT GCGAAAGAGG CAATTCAGAT TGGTGCTGAC
GATTACCTGG TAAAATACAC CTTAACGAAA GAAAAACTAA TCGAGTCACT TAATAAAATG
AGTATTAAAT ACAATAAACG TAATAATATG AACGAAAAAA TCAATCGTTA TACGGAGGAA
ATGAACGAAA ACCGTAATAA CTTTAAAGAA AGTTTATTAT ATAGTATTGT AAAAGATTTA
ACACAGGATA TTGATGGACT GAGTGAAAAG ATGAGTTTGT ATCAAATAAA AAAACCATCG
CACAGCTACT GCCTGATTGG ATTATACGTT AATTATAATG AACGGATTTT AATTGAAAAC
GGAGAACCTC AAAAGAAGCT TTGGCGTTAT GAAATAGCAG ATATCATTAG TGAGGAATTA
AATAACAATG GAATAACGGA TGAGGTTTTT CCATATGACA AATACGTAAT TATCTTACAT
GAATGGAGCA CCTTGGACAA AACATTCTCT GTAAAATACA AAAATATAAT AGAGAAAATA
TGTAACATTA TTAATGAAAC CATGAGAATG AGGTTAGCGA TATGTGTCAG TGATACATAT
GATAATTTTT GGGACATTAA GAAGGGAATT GTTGATTTAA ACAACCGTAA AATGGCACCC
TTTTATCTGA AGGGGAAAAT AGAATTAAGG CGTGATGATG TAACAAAATT TACAGTAGTT
TCTCATGAAA TATTTGATCA ACTTAATGAG CGGTTTAAAA TAGCATTTAG AAATGGCGAG
AATTTTATTG AAGAAATGGA CAAATTATGT GTAGAGATTG AAAAAAAGAA TTATAATCCG
GATATCATAA GAAAACTATT TCAGTTGTTT TTGTTCAGTA TTTATAGAGA AACAATAAAA
ATGAATAAAA GCGTAAATGA AATTCCGTTA GAAGATGCGT CTTTCCAGTT TTGTAAAGAT
GCATTATATC AGCAATATGA TTGGTATATC GGTAATTATA AGGAACAATT AAATAAGAAT
TACAACGACG ATATTAAAAG CATACTTAGT TACGTGGATG AAAATCTTGA TAAGCCGATT
AGTTTACAAG GTGTAGCAGA TTCTATCTAT AAAAACAGTA GCTATCTTAG CCGTTTGTTT
AAACAGAACA TAGGTATGAG TTTTACTGAC TATTTAATAA AAAGACGAAT TGAGATGGCA
TCTTATTTAT TGACGGAGAC GAATCTGCCT GTAGAGGAAG TCGGAAGACG GGTAGGAATA
AATAATGTAA GCTATTTTTA CCGATTTTAT AAACGAGAAA CGGGTAAAAC ACCTAAGAAT
AACAATTCGT AG
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| Protein sequence | MMNAVLVDDD IEMLEMLSHL IDWQTYGFSI SGKYNNGENA LKSIGEEKVD LLVTDITMPA
MDGFELARNL RKINPEMNVI FLTCHEDFSY AKEAIQIGAD DYLVKYTLTK EKLIESLNKM
SIKYNKRNNM NEKINRYTEE MNENRNNFKE SLLYSIVKDL TQDIDGLSEK MSLYQIKKPS
HSYCLIGLYV NYNERILIEN GEPQKKLWRY EIADIISEEL NNNGITDEVF PYDKYVIILH
EWSTLDKTFS VKYKNIIEKI CNIINETMRM RLAICVSDTY DNFWDIKKGI VDLNNRKMAP
FYLKGKIELR RDDVTKFTVV SHEIFDQLNE RFKIAFRNGE NFIEEMDKLC VEIEKKNYNP
DIIRKLFQLF LFSIYRETIK MNKSVNEIPL EDASFQFCKD ALYQQYDWYI GNYKEQLNKN
YNDDIKSILS YVDENLDKPI SLQGVADSIY KNSSYLSRLF KQNIGMSFTD YLIKRRIEMA
SYLLTETNLP VEEVGRRVGI NNVSYFYRFY KRETGKTPKN NNS
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