Gene Pfl01_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5488 
Symbol 
ID3713812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6155728 
End bp6156474 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID 
Producttwo-component response regulator AlgR 
Protein accessionYP_351216 
Protein GI77461709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC TGATCGTTGA TGACGAACCA CTGGCCCGCG AGCGACTCAG CCGAATGGTG 
AGCGAGCTCG AGGGGTACAC AGTCCTGGAG CCCAGCGCCA CCAATGGCGA AGAGGCGTTG
GCACTGATCG ACAGCCACAA GCCGGATATC GTACTGCTCG ATATCCGCAT GCCGGGCCTC
GATGGCCTGC AGGTGGCTGC CCGTCTGTGC GAACGCGAAA CCCCGCCGGC CGTGGTGTTT
TGCGCAGGTC CCGATGAATT TGCCGTGGAA GCCCTGCAGG CCAGCGCCGT GGGCTATGTG
GTGAAACCCG TGCGAACCGA ACATCTGCAT GACGCCCTGA AACGGGCTGA ACGTCCCAAC
CGGGCCCAGC TCTCGGCCCT GACCCGTCCT GCCGCCGAAA GCGGTAACGG CCCGCGCAGC
CACATCAGCG CCCGCACCCG CAAAGGCATC GAACTGATTC CGCTGGATCA GGTGGTGTAC
TTCATTGCCG ACCACAAATA CGTGACATTG CGCCACGAAG CTGGCGAAGT CCTTCTGGAT
GAGCCGCTCA AGGCGCTGGA AGACGAATTC GGCGAGCGCT TCGTGCGGAT CCACCGCAAC
GCGCTGGTCG CCCGCGACCG CATCGAGCGT CTGCAACGTA CACCGCTGGG CCACTTCCAG
TTGTTCCTCA AGGGCCTCAA CGGTGACGCG CTGATCGTCA GCCGCCGGCA TGTGGCGGGC
GTGCGCAAAA TGATGCAGGG GCTTTAG
 
Protein sequence
MNVLIVDDEP LARERLSRMV SELEGYTVLE PSATNGEEAL ALIDSHKPDI VLLDIRMPGL 
DGLQVAARLC ERETPPAVVF CAGPDEFAVE ALQASAVGYV VKPVRTEHLH DALKRAERPN
RAQLSALTRP AAESGNGPRS HISARTRKGI ELIPLDQVVY FIADHKYVTL RHEAGEVLLD
EPLKALEDEF GERFVRIHRN ALVARDRIER LQRTPLGHFQ LFLKGLNGDA LIVSRRHVAG
VRKMMQGL