Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5488 |
Symbol | |
ID | 3713812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6155728 |
End bp | 6156474 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | two-component response regulator AlgR |
Protein accession | YP_351216 |
Protein GI | 77461709 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCC TGATCGTTGA TGACGAACCA CTGGCCCGCG AGCGACTCAG CCGAATGGTG AGCGAGCTCG AGGGGTACAC AGTCCTGGAG CCCAGCGCCA CCAATGGCGA AGAGGCGTTG GCACTGATCG ACAGCCACAA GCCGGATATC GTACTGCTCG ATATCCGCAT GCCGGGCCTC GATGGCCTGC AGGTGGCTGC CCGTCTGTGC GAACGCGAAA CCCCGCCGGC CGTGGTGTTT TGCGCAGGTC CCGATGAATT TGCCGTGGAA GCCCTGCAGG CCAGCGCCGT GGGCTATGTG GTGAAACCCG TGCGAACCGA ACATCTGCAT GACGCCCTGA AACGGGCTGA ACGTCCCAAC CGGGCCCAGC TCTCGGCCCT GACCCGTCCT GCCGCCGAAA GCGGTAACGG CCCGCGCAGC CACATCAGCG CCCGCACCCG CAAAGGCATC GAACTGATTC CGCTGGATCA GGTGGTGTAC TTCATTGCCG ACCACAAATA CGTGACATTG CGCCACGAAG CTGGCGAAGT CCTTCTGGAT GAGCCGCTCA AGGCGCTGGA AGACGAATTC GGCGAGCGCT TCGTGCGGAT CCACCGCAAC GCGCTGGTCG CCCGCGACCG CATCGAGCGT CTGCAACGTA CACCGCTGGG CCACTTCCAG TTGTTCCTCA AGGGCCTCAA CGGTGACGCG CTGATCGTCA GCCGCCGGCA TGTGGCGGGC GTGCGCAAAA TGATGCAGGG GCTTTAG
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Protein sequence | MNVLIVDDEP LARERLSRMV SELEGYTVLE PSATNGEEAL ALIDSHKPDI VLLDIRMPGL DGLQVAARLC ERETPPAVVF CAGPDEFAVE ALQASAVGYV VKPVRTEHLH DALKRAERPN RAQLSALTRP AAESGNGPRS HISARTRKGI ELIPLDQVVY FIADHKYVTL RHEAGEVLLD EPLKALEDEF GERFVRIHRN ALVARDRIER LQRTPLGHFQ LFLKGLNGDA LIVSRRHVAG VRKMMQGL
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