| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3211 |
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| Symbol | |
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| ID | 5741989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3915499 |
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| End bp | 3917145 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641294311 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_001560304 |
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| Protein GI | 160881336 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0042226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGTT ACGAATATTG TACTGTCGTC CAAATTCACG GGATTGCGGC AGAATGGAGG
ATTAACATGT TAAGAGTCTT AGTAGTGGAT GATGAGCCAT ATATCAAACA AGGGTTAGCA
ATGCTTATCA ATTGGATGGC AGAAGGGTTT ACAATCATTG GTGAAGCAGC GAACGGAAAA
GAAGCGATAC GATTTTTACA GAAAACGAAA GTAGATCTTA TCATTGCAGA TATTAAAATG
CCTGAGATGA ATGGTATCGA GCTATTAGAG TACATAAAAA AAGAAAAATT ATCCGATGCA
TCCTATATTA TTCTTAGTGG ATATTATGAC TTTCAATATG CTAGGTCTGC AATCCAACAC
AACTGTTGTG ATTATCTTTT AAAGCCTGTA CAAAAAGATG AATTACTAGA GGTACTTCGT
AGAGTTTCAC AAAAAAGCAA AGAGCTTAAT AATCGGCAAA TAGAAAATAG AGAAAAGGAA
AGAGCACTCT TTGACCGCAA TCTTTTAGCA CTCATCTGGG GAAAATTCGA TAATTACAAT
ATCGAATATG TAACAAAACA TTTAATGCTA TCAAAAGAAA TAAAGTACAT AACTATTAAT
CTTGATTTTA CAAATCAGGA AAATCTAACA GAATCAGATA AACGTAATAT TCAGAAGAAT
CTCTATATGC AGGCAAGAGA GCTACTAAAA GTTGATGAAT ACCACGTTAT ATTTGATGTC
GGTAAACAAG ATTCCTCTTA TGATATTGGT TTTATTTATT GTGATTATCT TGCAAATGAA
GCGGGGGTAA CCGAGGGGGA ATATTTAAAA CAATTCAGCC AACTATTAAG CGAAGGAATC
AACTGCAAAA TTATGCTATT TGTAGGGAAT AAGGTTGATT CGATAGCAAG GCTATCAGAG
TCGTATCAAA CCGCAATGAT TGCAAAGACT TTACAGATGT TTCGAAATGA TAAGGATATT
ACCTTTTATG AAGAAAATAT GAATTTAAAT GGAGCCTCCT TATTAGAAAG AAGAAAATTA
GATATCTTAA TTCAAGCAGT GGAAGAAAAC AATAAAGAGG AAATTTCCTC AATGGTGGAT
AGTATTTATG ATGATATTAA TCAGTCTAAT ATGGATTATA ACCTTATAAA TCTAAACATT
AGTTACATAT TATATCAACT GATTTATTTG GCAACGAAAC AGGATGATAA TATTAATCAA
GAAGAAATCC TACAATATAT TAGTAAAAAT GCCTTCCATA GAGATGCTAT GCGTGGAAGC
CGAAAGCATT TTAAGTTATT TGCTTATGAT TTTTCAGATT ATTTGCAACA ACTTCGTAAA
AATGTCTCGA AAGGTATTCT GGCTAGTATT GAAAGGGAAA TTGAGGAGAA CTATGCTGAG
AATATAAGTT TAAAATCTTT GAGTGAAAAG TATTTCATTA ATAGTGCTTA CTTGGGCCAG
GTATTCAAGA AACAATTTGG CCTACCATTT AAAGATTATT TGAATAATCA TCGTATCGAC
CGGGCAGCGG AGTTATTGCT GCGTACGGAC GAAAAGGTGT ATATCGTAGC TGAATTGGTT
GGTTATCATA ACCTAGATTA CTTCATCAAT CGTTTTGTCT CCGTGAAGGG TTGTACCCCG
ACAAGATATC GAAATCAAAG TAGGTAA
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| Protein sequence | MTRYEYCTVV QIHGIAAEWR INMLRVLVVD DEPYIKQGLA MLINWMAEGF TIIGEAANGK
EAIRFLQKTK VDLIIADIKM PEMNGIELLE YIKKEKLSDA SYIILSGYYD FQYARSAIQH
NCCDYLLKPV QKDELLEVLR RVSQKSKELN NRQIENREKE RALFDRNLLA LIWGKFDNYN
IEYVTKHLML SKEIKYITIN LDFTNQENLT ESDKRNIQKN LYMQARELLK VDEYHVIFDV
GKQDSSYDIG FIYCDYLANE AGVTEGEYLK QFSQLLSEGI NCKIMLFVGN KVDSIARLSE
SYQTAMIAKT LQMFRNDKDI TFYEENMNLN GASLLERRKL DILIQAVEEN NKEEISSMVD
SIYDDINQSN MDYNLINLNI SYILYQLIYL ATKQDDNINQ EEILQYISKN AFHRDAMRGS
RKHFKLFAYD FSDYLQQLRK NVSKGILASI EREIEENYAE NISLKSLSEK YFINSAYLGQ
VFKKQFGLPF KDYLNNHRID RAAELLLRTD EKVYIVAELV GYHNLDYFIN RFVSVKGCTP
TRYRNQSR
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