Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1982 |
Symbol | |
ID | 7310694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2345505 |
End bp | 2347139 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643608917 |
Product | two component transcriptional regulator, AraC family |
Protein accession | YP_002506310 |
Protein GI | 220929401 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.184696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGGC TTTTAGTAGT TGAAGATGAA GAAATGATAA GGAACAAAAT AATATACAAT ACAAATTGGA AAGAACACGG GGTTATCGAG GTTTTTCAAG CAAGTAACGG ATTAGAGGCA ATTGACATTG TAAGAAATAA CAACATTGAT ATAGTTATTA CCGATATACA AATGCCCGAA ATGAATGGTA TTGAGCTTAT CAGGGAGATA AGGAGCCTTA ATCGGGGCAT CAAGTGTATA ATTATTACGG CATATGCTGA GTTCGAGTAT GCCAAGGAAT CGGTAAAACT CAATGTTAAT GATTATATTC TTAAACCTTT TAAATCCAAG GATCTTTTAT ATATTGTAAA AAAGCTCTTG GAGGAAATTG TAAGGGAGAG GAATGAACGT GTCGAGGTTG AAAATCTGAG AAGGCAGTTG AGAGAAAATA AAAAGGCCTT GAGGGAGAAA CTTTTGAATG ATTTACTCAG CAATAGCTAT ATCGGTGATG TAGATGACGA CCTAAATTAT CTTGAGCTGT TAGAATTAAA AAACCGGGAA TATTTTATCG CCGTAATAAA TATTAATAAC TTCATGGAGC TTATTAAAGA GGAGGATGAG GAACAGAAAT ATATAGTAAA CCTGTCCTTC TATAACCTTG TAACAAAATT TCTTTCATCC TTAGCGACAG ACTCATCCAA TACCTTGGAC ACTAAGCTGG TTTACTCTGT CATAAACTAC AAAATAGATC AAATTGTAAT TGCTGTCTAC AATGATATAG ATAAATTTAT TCCGGCATTT GAGGATTTAA TTAAGGCAGG AAGACGGGAA CTCGGATTTT GCATGACTAC TGGTATCGGT AATAAATACA AAAATCTTAC AGATATGCAT ATATCCTACA AAGAAGCTTG TTCGGCAGCC TTACTTGACC GTGTTTACGG CAGAGGAAAT GTTTACATAT TCAATGACCT TAATTTTGGC AACAAGGTGT ACAGTAAACA GCTTCACATT CTCGGAGACA CCAAGCTGTA CGATGACCTT AAAATCGGTG CGTTTCCCGA AATAAAGAAG GATATTGAAA ATGTTATTAC ACAAATTAAG AGTTCTAAGC TTGAACTGGA TGCTATAAAT ACCATTATTT ACAATATAAT ACTTTTATCC TGTAAAACCA TAAATGAGTT GGGCTATGAT GTTTTTGAAA TAATGGGTGA GGATTTCAAC CTTCATTTTG ATGTTAAAGA AATTAATAAT CTGGTGCAGC TTGAAGAATG GCTATTAAGC TTCTTTTATA AAGTAAATGA ATATATTAAC CGTAAAAGAA GCAACAGAAA TGAAAAATTA CTCTCCAAAG TGAAGGATTA CGTGGATAGG AATTATAGCG AAAATATAAC TCTGACCAGC ATATCAAAGG ATTTTGGAAT CAGTTCAGGG TACCTAAGTG TACTGTTCAA TGACTATATT GGTCAGAATT TTATAGACTA CCTTACCAAC CTAAGAATAC AAAATGCTAA AAATCTGCTT AAAAGTACAG ACCTGAAAAT CTATGAAATT GCAGACAGGG TGGGTTATCG TGATGCCTAT TATTTCAGTA CGGCATTCAA AAAAAGTGTG GGTATTAATC CTACTGACTA TAGAGAAAAG CTGAATATTC TTTAA
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Protein sequence | MFRLLVVEDE EMIRNKIIYN TNWKEHGVIE VFQASNGLEA IDIVRNNNID IVITDIQMPE MNGIELIREI RSLNRGIKCI IITAYAEFEY AKESVKLNVN DYILKPFKSK DLLYIVKKLL EEIVRERNER VEVENLRRQL RENKKALREK LLNDLLSNSY IGDVDDDLNY LELLELKNRE YFIAVININN FMELIKEEDE EQKYIVNLSF YNLVTKFLSS LATDSSNTLD TKLVYSVINY KIDQIVIAVY NDIDKFIPAF EDLIKAGRRE LGFCMTTGIG NKYKNLTDMH ISYKEACSAA LLDRVYGRGN VYIFNDLNFG NKVYSKQLHI LGDTKLYDDL KIGAFPEIKK DIENVITQIK SSKLELDAIN TIIYNIILLS CKTINELGYD VFEIMGEDFN LHFDVKEINN LVQLEEWLLS FFYKVNEYIN RKRSNRNEKL LSKVKDYVDR NYSENITLTS ISKDFGISSG YLSVLFNDYI GQNFIDYLTN LRIQNAKNLL KSTDLKIYEI ADRVGYRDAY YFSTAFKKSV GINPTDYREK LNIL
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