More than 300 homologs were found in PanDaTox collection
for query gene Avin_47610 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_47610  encystment and alginate biosynthesis response regulator; AlgR  100 
 
 
251 aa  504  9.999999999999999e-143  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  80.57 
 
 
248 aa  404  1.0000000000000001e-112  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  80.57 
 
 
248 aa  406  1.0000000000000001e-112  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal 
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  79.76 
 
 
248 aa  401  1e-111  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0063  response regulator receiver:LytTr DNA-binding region  77.73 
 
 
248 aa  394  1e-109  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5488  two-component response regulator AlgR  77.33 
 
 
248 aa  393  1e-108  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  74.49 
 
 
248 aa  383  1e-105  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0255  LytTR family two component transcriptional regulator  72.47 
 
 
247 aa  370  1e-102  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0210  LytTR family two component transcriptional regulator  72.87 
 
 
247 aa  372  1e-102  Pseudomonas putida GB-1  Bacteria  normal  0.375452  normal 
 
 
-
 
NC_009512  Pput_0207  LytTR family two component transcriptional regulator  72.47 
 
 
247 aa  371  1e-102  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0185  LytTR family two component transcriptional regulator  72.06 
 
 
247 aa  367  1e-101  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  48.58 
 
 
243 aa  230  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3668  two-component response regulator AlgR  48.78 
 
 
243 aa  222  4e-57  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00827536  normal  0.334671 
 
 
-
 
NC_007969  Pcryo_0097  LytR/AlgR family transcriptional regulator  42.11 
 
 
245 aa  203  2e-51  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  46.69 
 
 
243 aa  196  4.0000000000000005e-49  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.000000000586434 
 
 
-
 
NC_010513  Xfasm12_1259  response regulator receiver protein  44.35 
 
 
252 aa  183  3e-45  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1226  LytTR family two component transcriptional regulator  43.93 
 
 
252 aa  181  1e-44  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  42.8 
 
 
252 aa  180  2e-44  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04138  two-component system regulatory protein  43.8 
 
 
245 aa  171  1e-41  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.739319  n/a   
 
 
-
 
NC_007298  Daro_3679  LytR/AlgR family transcriptional regulator  41.41 
 
 
262 aa  159  6e-38  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0231  LytR/AlgR family transcriptional regulator  43.65 
 
 
254 aa  156  3e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.740894 
 
 
-
 
NC_011071  Smal_3531  two component transcriptional regulator, LytTR family  44.67 
 
 
243 aa  154  9e-37  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0036  LytR/AlgR family transcriptional regulator  39.92 
 
 
248 aa  150  2e-35  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1113  LytR/AlgR family transcriptional regulator  36.86 
 
 
256 aa  129  3e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.45992  normal  0.29087 
 
 
-
 
NC_007948  Bpro_3670  LytR/AlgR family transcriptional regulator  35.32 
 
 
246 aa  123  2e-27  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2443  LytTR family two component transcriptional regulator  34.48 
 
 
279 aa  124  2e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2880  response regulator receiver protein  37.35 
 
 
253 aa  124  2e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.313062  normal  0.0817302 
 
 
-
 
NC_008782  Ajs_3314  LytR/AlgR family transcriptional regulator  36.82 
 
 
250 aa  119  3.9999999999999996e-26  Acidovorax sp. JS42  Bacteria  normal  0.742064  normal  0.13531 
 
 
-
 
NC_009456  VC0395_0387  response regulator  32.14 
 
 
261 aa  117  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3089  LytTR family two component transcriptional regulator  36.24 
 
 
278 aa  116  3.9999999999999997e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_3096  response regulator receiver protein  34.26 
 
 
247 aa  116  3.9999999999999997e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  31.13 
 
 
260 aa  115  6e-25  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_013889  TK90_0013  two component transcriptional regulator, LytTR family  35.43 
 
 
241 aa  115  6e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.349161 
 
 
-
 
NC_013422  Hneap_2149  two component transcriptional regulator, LytTR family  36.03 
 
 
234 aa  115  6.9999999999999995e-25  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00472108  n/a   
 
 
-
 
NC_010682  Rpic_1227  two component transcriptional regulator, LytTR family  31.14 
 
 
277 aa  114  1.0000000000000001e-24  Ralstonia pickettii 12J  Bacteria  normal  0.299238  normal  0.813842 
 
 
-
 
NC_012856  Rpic12D_1290  two component transcriptional regulator, LytTR family  31.39 
 
 
277 aa  114  2.0000000000000002e-24  Ralstonia pickettii 12D  Bacteria  normal  normal  0.212023 
 
 
-
 
NC_007509  Bcep18194_C6684  LytR/AlgR family transcriptional regulator  34.14 
 
 
243 aa  113  3e-24  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0190  LytR/AlgR family transcriptional regulator  34.94 
 
 
244 aa  113  3e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.625509  n/a   
 
 
-
 
NC_007908  Rfer_1712  LytR/AlgR family transcriptional regulator  34.52 
 
 
246 aa  113  3e-24  Rhodoferax ferrireducens T118  Bacteria  normal  0.42147  n/a   
 
 
-
 
NC_011662  Tmz1t_1435  two component transcriptional regulator, LytTR family  36.92 
 
 
264 aa  113  3e-24  Thauera sp. MZ1T  Bacteria  normal  0.314663  n/a   
 
 
-
 
NC_008752  Aave_1947  LytR/AlgR family transcriptional regulator  36.65 
 
 
248 aa  111  1.0000000000000001e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  0.298927  decreased coverage  0.00301393 
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  31.72 
 
 
257 aa  110  2.0000000000000002e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4495  LytTR family two component transcriptional regulator  34.54 
 
 
245 aa  107  2e-22  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.17015 
 
 
-
 
NC_007650  BTH_II1400  response regulator  32.93 
 
 
243 aa  107  2e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5318  LytTR family two component transcriptional regulator  32.43 
 
 
253 aa  106  3e-22  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.541549 
 
 
-
 
NC_013131  Caci_0068  two component transcriptional regulator, LytTR family  34.13 
 
 
244 aa  105  5e-22  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00288448  normal 
 
 
-
 
NC_011992  Dtpsy_1069  two component transcriptional regulator, LytTR family  34.66 
 
 
276 aa  105  8e-22  Acidovorax ebreus TPSY  Bacteria  normal  0.257927  n/a   
 
 
-
 
NC_013216  Dtox_0399  two component transcriptional regulator, LytTR family  30.25 
 
 
242 aa  105  9e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A2603  response regulator  31.98 
 
 
243 aa  104  1e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1363  two component transcriptional regulator, LytTR family  35.96 
 
 
248 aa  105  1e-21  Variovorax paradoxus S110  Bacteria  normal  0.124915  n/a   
 
 
-
 
NC_013457  VEA_000974  response regulator of the LytR/AlgR family  27.56 
 
 
263 aa  103  2e-21  Vibrio sp. Ex25  Bacteria  normal  0.728867  n/a   
 
 
-
 
NC_009784  VIBHAR_07024  transcriptional regulator  27.56 
 
 
263 aa  103  3e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_3613  two component transcriptional regulator, LytTR family  32.44 
 
 
281 aa  103  3e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2328  LytTR family two component transcriptional regulator  35.15 
 
 
255 aa  102  4e-21  Opitutus terrae PB90-1  Bacteria  normal  0.261765  decreased coverage  0.00199939 
 
 
-
 
NC_011992  Dtpsy_2666  two component transcriptional regulator, LytTR family  34.5 
 
 
250 aa  102  6e-21  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1352  two-component response regulator transcription regulator protein  30.71 
 
 
270 aa  101  1e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1381  LytR/AlgR family transcriptional regulator  30.88 
 
 
273 aa  101  1e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.557466 
 
 
-
 
NC_008048  Sala_0930  response regulator receiver protein  31.64 
 
 
243 aa  100  2e-20  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.748451 
 
 
-
 
NC_011830  Dhaf_4408  two component transcriptional regulator, LytTR family  29.43 
 
 
268 aa  100  2e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1819  LytTr DNA-binding response regulator  31.3 
 
 
260 aa  99.8  4e-20  Colwellia psychrerythraea 34H  Bacteria  normal  0.148301  n/a   
 
 
-
 
NC_007517  Gmet_2697  LytR/AlgR family transcriptional regulator  30.98 
 
 
240 aa  99.8  4e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  32.64 
 
 
255 aa  99.4  5e-20  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  28.14 
 
 
260 aa  99.4  5e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal 
 
 
-
 
NC_007912  Sde_3733  response regulator receiver domain-containing protein  30.04 
 
 
249 aa  99.4  6e-20  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.766169 
 
 
-
 
NC_013203  Apar_1323  two component transcriptional regulator, LytTR family  28.69 
 
 
237 aa  98.6  7e-20  Atopobium parvulum DSM 20469  Bacteria  normal  0.0540721  normal  0.0273831 
 
 
-
 
NC_009077  Mjls_4280  response regulator receiver protein  34.94 
 
 
269 aa  98.6  8e-20  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4494  LytTr DNA-binding region  36.25 
 
 
250 aa  98.6  8e-20  Salinispora tropica CNB-440  Bacteria  normal  0.0706486  normal  0.304613 
 
 
-
 
NC_011071  Smal_0421  two component transcriptional regulator, LytTR family  33.33 
 
 
256 aa  98.6  9e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.268274 
 
 
-
 
NC_008786  Veis_2282  response regulator receiver protein  30.68 
 
 
276 aa  97.8  1e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.81  normal 
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  31.1 
 
 
266 aa  97.8  1e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_12140  response regulator of the LytR/AlgR family  36.99 
 
 
255 aa  97.1  2e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4386  two component transcriptional regulator, LytTR family  27.86 
 
 
260 aa  97.4  2e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2385  response regulator receiver protein  28.21 
 
 
272 aa  97.4  2e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1148  response regulator receiver protein  35.89 
 
 
295 aa  97.1  2e-19  Acidovorax sp. JS42  Bacteria  normal  0.573371  normal 
 
 
-
 
NC_013093  Amir_5278  two component transcriptional regulator, LytTR family  35 
 
 
281 aa  96.3  4e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.415246  n/a   
 
 
-
 
NC_009675  Anae109_1440  putative two-component response-regulatory protein YehT  32.14 
 
 
236 aa  96.7  4e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4051  response regulator receiver protein  34.54 
 
 
269 aa  95.9  6e-19  Mycobacterium sp. MCS  Bacteria  normal  0.243327  n/a   
 
 
-
 
NC_008705  Mkms_4126  response regulator receiver protein  34.54 
 
 
269 aa  95.9  6e-19  Mycobacterium sp. KMS  Bacteria  normal  0.217512  normal  0.408771 
 
 
-
 
NC_008726  Mvan_4560  response regulator receiver protein  33.33 
 
 
269 aa  95.5  6e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.850639 
 
 
-
 
NC_009953  Sare_5008  LytTR family two component transcriptional regulator  35.42 
 
 
250 aa  95.1  9e-19  Salinispora arenicola CNS-205  Bacteria  normal  0.135227  hitchhiker  0.0000288771 
 
 
-
 
NC_008752  Aave_2035  response regulator receiver protein  32.1 
 
 
282 aa  95.1  9e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.150352  normal 
 
 
-
 
NC_009718  Fnod_1246  LytTR family two component transcriptional regulator  24.32 
 
 
254 aa  94.4  1e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  29.03 
 
 
252 aa  94.4  1e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_011899  Hore_10420  two component transcriptional regulator, LytTR family  27.78 
 
 
253 aa  95.1  1e-18  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000460621  n/a   
 
 
-
 
NC_008577  Shewana3_2594  putative two-component response-regulatory protein YehT  28.63 
 
 
236 aa  94.7  1e-18  Shewanella sp. ANA-3  Bacteria  normal  0.0103906  hitchhiker  0.00157605 
 
 
-
 
NC_013037  Dfer_0804  two component transcriptional regulator, LytTR family  28.06 
 
 
251 aa  94.7  1e-18  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  29.2 
 
 
251 aa  94  2e-18  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3416  putative two-component response-regulatory protein YehT  32.11 
 
 
237 aa  94.4  2e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.329348  normal  0.0577965 
 
 
-
 
NC_010571  Oter_0067  LytTR family two component transcriptional regulator  29.22 
 
 
268 aa  93.2  3e-18  Opitutus terrae PB90-1  Bacteria  normal  0.169577  normal  0.169612 
 
 
-
 
NC_007333  Tfu_2858  response regulator receiver  36.76 
 
 
264 aa  93.6  3e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4129  two component transcriptional regulator, LytTR family  33.05 
 
 
271 aa  93.2  3e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1548  putative two-component response-regulatory protein YehT  27.42 
 
 
236 aa  93.2  3e-18  Shewanella putrefaciens CN-32  Bacteria  normal  0.496368  n/a   
 
 
-
 
NC_007347  Reut_A1965  response regulator receiver:LytTr DNA-binding region  29.43 
 
 
273 aa  93.2  4e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.864475  n/a   
 
 
-
 
NC_013132  Cpin_4010  two component transcriptional regulator, LytTR family  31.92 
 
 
231 aa  93.2  4e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0569074  decreased coverage  0.00157623 
 
 
-
 
NC_007954  Sden_0847  response regulator receiver  28.25 
 
 
232 aa  92.8  4e-18  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2502  putative two-component response-regulatory protein YehT  28.23 
 
 
236 aa  93.2  4e-18  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00178929  normal  0.0452702 
 
 
-
 
NC_010814  Glov_3544  two component transcriptional regulator, LytTR family  29.46 
 
 
251 aa  92.8  5e-18  Geobacter lovleyi SZ  Bacteria  normal  0.0394969  n/a   
 
 
-
 
NC_009831  Ssed_2883  putative two-component response-regulatory protein YehT  26.03 
 
 
236 aa  92.8  5e-18  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000903631  unclonable  0.0000000000401288 
 
 
-
 
NC_008321  Shewmr4_2432  putative two-component response-regulatory protein YehT  27.82 
 
 
236 aa  92.8  5e-18  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000158974  hitchhiker  0.00361478 
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  29.15 
 
 
275 aa  92.4  6e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
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