Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0618 |
Symbol | |
ID | 5743532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 804146 |
End bp | 804922 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641291730 |
Product | two component AraC family transcriptional regulator |
Protein accession | YP_001557744 |
Protein GI | 160878776 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000605397 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAT TAATTATTAT TGACGATGAG GAAAATATTT GCCAGGGAAC TGCTCATATT TTCCCGTGGG ATATGGTAGG TTTACAAGTT GCTGCAACCT TTACAAGTGG TAAGCAGGCA CTTGAATATG TACATAAAAA TCATGTCGAT GTTATCTTAA CCGATATTCG TATGCCTCTG ATGTCAGGCC TCGAAATTGC GAAGGAAATT AACCTTTTCA ATCCAGACAT AAAAGTAGTA TTTATGAGTG GTTTTAGTGA CTTTAACTAC ATGAAAGAAG CACTGTTACA CTCTGTTAGT GACTATTTAT TAAAACCAAT ACGTTATGAC GAATTATTAA CTTGCTTTCA AAGAATTAAA GAGCAGCTAG ATTCAAAATT ATGCATTAAA GAAGCAGAGG TTCAACCGTC CTATTATCAA CAAATAGTTA CTACCACTAT GAATTACATA AAAGAAAATG TAAAAGATGC AACCTTAGAG TCAGCTGCCA TTCATGTTAA CATGAGCCCA AGCTATCTCT CTAGATTAAT AAAGGAGAAA TCCGGAGTAA ACTTCTCTAC TCATCTATTG AATTGTAGAA TGAAGAAAGC TGCTAAACTG CTGCGAGGAA TTGAATATAA GCAATATGAA ATCGCATTTT TAGTGGGCTA CGATAATCCC AAAAATTTTT CAAGGGCATT TAAACAATAC TACGGAGTTA CTCCAAAAGA GTTTAGGGAA AGTGAGCTAG TGAATGATTT TGACCTTAGT TCTAAGGGGA ATATTAATGA AGCGTAA
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Protein sequence | MYQLIIIDDE ENICQGTAHI FPWDMVGLQV AATFTSGKQA LEYVHKNHVD VILTDIRMPL MSGLEIAKEI NLFNPDIKVV FMSGFSDFNY MKEALLHSVS DYLLKPIRYD ELLTCFQRIK EQLDSKLCIK EAEVQPSYYQ QIVTTTMNYI KENVKDATLE SAAIHVNMSP SYLSRLIKEK SGVNFSTHLL NCRMKKAAKL LRGIEYKQYE IAFLVGYDNP KNFSRAFKQY YGVTPKEFRE SELVNDFDLS SKGNINEA
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