Gene Csal_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2132 
Symbol 
ID4026469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2400203 
End bp2400847 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content59% 
IMG OID637967334 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_574182 
Protein GI92114254 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0449794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCAAGG TTCTTGTCGC TGACGATCAC CATTTGGTAC GTACTAGCAT CGCCCGCATG 
CTCGACTCCG AGGACGGCTT GAAGGTCATC GCCGAGGCCG TCGATGGCGA GGAGGCCGTC
AACATGGCGC GTGAATTGCG CCCCGATATC GTGTTGATGG ACATCCGCAT GCCCGGCATC
GGCGGGCTCG AAGCCACGCG CAAGATCATG CGCGGCATGT CGGATATCAA GGTCGTGATC
GTGACCGCCT TTCTGGAGGA GGCCTTTGCG CAACGCCTGA TGGACGCCGG TGCCGCGGGC
TTCATCAGCA AGGGCACGGA GCTCGATGAA ATGGTGCGTG CCATCCGCGC CATTTTCGAT
GGGCAGCGCT ACATCAGCCC CGACATCGCG CAGAAAGTCG TGCTTTCCAA GATGGGGACA
CAGGACAATC CCTTCGATCA ACTCTCGCAT CGCGAACTGC AGGTCGCGAT GATGATCGTC
AATTGTCAGA AGGTCAGCGA TATATCCGAT CGCCTGTTCC TGAGCCCCAA GACGGTCAAC
ACCTACCGCT ACCGCATTTT CGAGAAGCTC AACGTCCAGT CCGACGTCGA ACTCACCCAC
CTCGGACTGC GCTATGGATT GATCGACGGC TACGAGGCGT CGTGA
 
Protein sequence
MIKVLVADDH HLVRTSIARM LDSEDGLKVI AEAVDGEEAV NMARELRPDI VLMDIRMPGI 
GGLEATRKIM RGMSDIKVVI VTAFLEEAFA QRLMDAGAAG FISKGTELDE MVRAIRAIFD
GQRYISPDIA QKVVLSKMGT QDNPFDQLSH RELQVAMMIV NCQKVSDISD RLFLSPKTVN
TYRYRIFEKL NVQSDVELTH LGLRYGLIDG YEAS