More than 300 homologs were found in PanDaTox collection
for query gene Bind_3835 on replicon NC_010580
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  45.7 
 
 
1361 aa  738    Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.78 
 
 
1190 aa  714    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  42.41 
 
 
1384 aa  727    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  40.13 
 
 
980 aa  655    Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  51.86 
 
 
1222 aa  847    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  100 
 
 
1167 aa  2388    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  42.25 
 
 
1218 aa  682    Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.73 
 
 
1008 aa  649    Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  39.8 
 
 
1008 aa  639    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.24 
 
 
1168 aa  661    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  39.46 
 
 
998 aa  639    Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  69.23 
 
 
1160 aa  1611    Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  41.82 
 
 
1535 aa  704    Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  40.53 
 
 
1408 aa  711    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  42.73 
 
 
1274 aa  676    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  38.55 
 
 
1371 aa  659    Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  41.52 
 
 
1380 aa  680    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.49 
 
 
1404 aa  701    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.11 
 
 
1000 aa  623  1e-177  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.79 
 
 
1163 aa  621  1e-176  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.82 
 
 
993 aa  613  9.999999999999999e-175  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.76 
 
 
971 aa  606  9.999999999999999e-173  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  38.79 
 
 
1035 aa  603  1.0000000000000001e-171  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  34.49 
 
 
1170 aa  600  1e-170  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  38.85 
 
 
879 aa  602  1e-170  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.51 
 
 
887 aa  601  1e-170  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  34.49 
 
 
1170 aa  600  1e-170  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.69 
 
 
1138 aa  598  1e-169  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  39 
 
 
868 aa  590  1e-167  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  38.5 
 
 
1006 aa  592  1e-167  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  39.93 
 
 
877 aa  578  1.0000000000000001e-163  Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  39.93 
 
 
1092 aa  575  1.0000000000000001e-162  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  38.19 
 
 
840 aa  574  1.0000000000000001e-162  Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  37.02 
 
 
1399 aa  570  1e-161  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  38.61 
 
 
1027 aa  571  1e-161  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  43.95 
 
 
1061 aa  568  1e-160  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  40 
 
 
1233 aa  565  1.0000000000000001e-159  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  34.02 
 
 
1149 aa  565  1.0000000000000001e-159  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  39.88 
 
 
1483 aa  562  1e-158  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  37.84 
 
 
840 aa  561  1e-158  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  39.95 
 
 
1279 aa  553  1e-156  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  34.21 
 
 
1215 aa  553  1e-156  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  40.07 
 
 
1242 aa  552  1e-155  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.76 
 
 
1063 aa  546  1e-154  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.93 
 
 
1324 aa  544  1e-153  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  34.59 
 
 
1344 aa  542  9.999999999999999e-153  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  39.2 
 
 
1045 aa  536  1e-151  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38 
 
 
852 aa  536  1e-151  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  33.89 
 
 
1348 aa  534  1e-150  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  38.35 
 
 
856 aa  535  1e-150  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.62 
 
 
1158 aa  529  1e-148  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.63 
 
 
1120 aa  520  1e-146  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  34.07 
 
 
1407 aa  519  1.0000000000000001e-145  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  35.26 
 
 
1303 aa  512  1e-143  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  37.43 
 
 
1165 aa  508  9.999999999999999e-143  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  38.46 
 
 
1445 aa  506  9.999999999999999e-143  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  31.97 
 
 
1337 aa  484  1e-135  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  32.53 
 
 
1200 aa  481  1e-134  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  35.93 
 
 
1306 aa  480  1e-134  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  36 
 
 
1453 aa  467  9.999999999999999e-131  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  33.49 
 
 
1499 aa  468  9.999999999999999e-131  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  37.05 
 
 
853 aa  469  9.999999999999999e-131  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  34.83 
 
 
1378 aa  466  1e-129  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  36.71 
 
 
1759 aa  463  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  36.19 
 
 
2468 aa  466  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  36.05 
 
 
1698 aa  461  9.999999999999999e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  33.45 
 
 
1010 aa  461  9.999999999999999e-129  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  33.65 
 
 
820 aa  458  1e-127  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  33.77 
 
 
1618 aa  438  1e-121  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  34.48 
 
 
1535 aa  424  1e-117  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  32.27 
 
 
1418 aa  426  1e-117  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  34.41 
 
 
1214 aa  409  1.0000000000000001e-112  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  33.89 
 
 
1220 aa  406  1e-111  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  33.63 
 
 
837 aa  385  1e-105  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  31.23 
 
 
823 aa  377  1e-103  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  32.64 
 
 
824 aa  368  1e-100  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  39.35 
 
 
629 aa  360  9.999999999999999e-98  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  30.59 
 
 
1089 aa  355  2e-96  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  29.85 
 
 
1248 aa  355  2.9999999999999997e-96  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  36.81 
 
 
639 aa  353  1e-95  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  38.28 
 
 
617 aa  345  2.9999999999999997e-93  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  30.58 
 
 
1193 aa  344  5e-93  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  31.57 
 
 
813 aa  340  8e-92  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  31.56 
 
 
1084 aa  327  6e-88  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  33.07 
 
 
1110 aa  320  1e-85  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  43.07 
 
 
432 aa  317  7e-85  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03023  methyltransferase  39.61 
 
 
604 aa  316  1.9999999999999998e-84  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.02 
 
 
1303 aa  273  1e-71  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  31.12 
 
 
631 aa  265  3e-69  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  30.22 
 
 
2031 aa  253  2e-65  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  32 
 
 
618 aa  230  1e-58  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  31.05 
 
 
617 aa  224  9e-57  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_007961  Nham_4618  signal transduction histidine kinase  31.79 
 
 
454 aa  209  3e-52  Nitrobacter hamburgensis X14  Bacteria  normal  0.723174  n/a   
 
 
-
 
NC_009636  Smed_2344  signal transduction histidine kinase  36.49 
 
 
500 aa  195  3e-48  Sinorhizobium medicae WSM419  Bacteria  hitchhiker  0.00211814  normal 
 
 
-
 
NC_009620  Smed_4932  signal transduction histidine kinase  33.61 
 
 
907 aa  182  4e-44  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.752686 
 
 
-
 
NC_009719  Plav_0358  signal transduction histidine kinase  33.88 
 
 
602 aa  178  7e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0965  signal transduction histidine kinase  37.03 
 
 
850 aa  177  9.999999999999999e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  39.08 
 
 
336 aa  174  1e-41  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_008254  Meso_1944  signal transduction histidine kinase  34.56 
 
 
507 aa  174  1e-41  Chelativorans sp. BNC1  Bacteria  normal  0.0183597  n/a   
 
 
-
 
NC_010511  M446_5584  signal transduction histidine kinase  35.59 
 
 
586 aa  173  2e-41  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
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