More than 300 homologs were found in PanDaTox collection
for query gene Sros_9353 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_9353  amino acid ABC transporter, periplasmic-binding protein, putative  100 
 
 
286 aa  567  1e-160  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.663488 
 
 
-
 
NC_014165  Tbis_3557  extracellular solute-binding protein family 3  68.05 
 
 
290 aa  373  1e-102  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.838933 
 
 
-
 
NC_013131  Caci_2775  extracellular solute-binding protein family 3  55.93 
 
 
294 aa  299  4e-80  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0757  extracellular solute-binding protein  56.97 
 
 
291 aa  289  3e-77  Frankia sp. CcI3  Bacteria  normal  0.953109  normal 
 
 
-
 
NC_013739  Cwoe_3098  extracellular solute-binding protein family 3  55.82 
 
 
293 aa  282  5.000000000000001e-75  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4575  extracellular solute-binding protein  54.68 
 
 
297 aa  275  5e-73  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6884  extracellular solute-binding protein family 3  54.22 
 
 
285 aa  266  2.9999999999999995e-70  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5107  extracellular solute-binding protein  43.17 
 
 
286 aa  197  2.0000000000000003e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0875  amino acid ABC transporter/signal transduction systems periplasmic protein  40.37 
 
 
287 aa  160  3e-38  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00496425  n/a   
 
 
-
 
NC_014212  Mesil_2804  extracellular solute-binding protein family 3  35.46 
 
 
276 aa  119  4.9999999999999996e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.22333 
 
 
-
 
NC_013946  Mrub_0661  extracellular solute-binding protein family 3  29.35 
 
 
279 aa  100  3e-20  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000289878  normal 
 
 
-
 
NC_011146  Gbem_0983  extracellular solute-binding protein family 3  33.2 
 
 
264 aa  94.7  2e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.0154796  n/a   
 
 
-
 
NC_012918  GM21_3277  extracellular solute-binding protein family 3  32.38 
 
 
264 aa  90.1  3e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_2962  extracellular solute-binding protein  30.45 
 
 
287 aa  89.7  5e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.209955  normal 
 
 
-
 
NC_008148  Rxyl_0501  extracellular solute-binding protein  29.36 
 
 
281 aa  89.4  6e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3149  extracellular solute-binding protein  30.58 
 
 
281 aa  89  8e-17  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1056  extracellular solute-binding protein  32.92 
 
 
250 aa  86.3  6e-16  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000133402  n/a   
 
 
-
 
NC_013159  Svir_38840  periplasmic component of amino acid ABC-type transporter/signal transduction system  30.87 
 
 
272 aa  85.9  8e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.621896 
 
 
-
 
NC_002939  GSU0800  amino acid ABC transporter, periplasmic amino acid-binding protein  32.79 
 
 
256 aa  84.7  0.000000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.38805  n/a   
 
 
-
 
NC_011729  PCC7424_1848  polar amino acid ABC transporter, inner membrane subunit  26.72 
 
 
513 aa  84.3  0.000000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0588  extracellular solute-binding protein family 3  33.02 
 
 
247 aa  84.3  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  hitchhiker  0.00341778  n/a   
 
 
-
 
NC_007348  Reut_B3585  extracellular solute-binding protein  29.69 
 
 
266 aa  84  0.000000000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.435512  n/a   
 
 
-
 
NC_011884  Cyan7425_1539  extracellular solute-binding protein family 3  30.42 
 
 
307 aa  83.6  0.000000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1294  extracellular solute-binding protein family 3  30.29 
 
 
263 aa  82.4  0.000000000000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0278324  normal  0.772509 
 
 
-
 
NC_014165  Tbis_0329  extracellular solute-binding protein family 3  30.83 
 
 
282 aa  80.9  0.00000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3886  amino acid ABC transporter permease  25.88 
 
 
501 aa  81.3  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0251  cystine transporter subunit  31.2 
 
 
264 aa  80.9  0.00000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4248  extracellular solute-binding protein  30.2 
 
 
266 aa  80.9  0.00000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0312845 
 
 
-
 
NC_013517  Sterm_2452  extracellular solute-binding protein family 3  30.31 
 
 
259 aa  81.3  0.00000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2009  cystine transporter subunit  28.63 
 
 
265 aa  80.5  0.00000000000003  Pseudomonas mendocina ymp  Bacteria  normal  0.163072  decreased coverage  0.0074335 
 
 
-
 
NC_004578  PSPTO_5180  cystine ABC transporter, periplasmic cystine binding protein  29.51 
 
 
268 aa  80.5  0.00000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0836  ABC amino acid transporter, periplasmic ligand binding protein  29.51 
 
 
266 aa  79.3  0.00000000000006  Burkholderia sp. 383  Bacteria  normal  normal  0.0996489 
 
 
-
 
NC_008025  Dgeo_1959  extracellular solute-binding protein  32.62 
 
 
222 aa  79.3  0.00000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.553895 
 
 
-
 
NC_013595  Sros_7637  extracellular solute-binding protein, family 3  26.9 
 
 
290 aa  79.3  0.00000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.636855 
 
 
-
 
NC_010551  BamMC406_0382  extracellular solute-binding protein  28.79 
 
 
266 aa  79  0.00000000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0366  extracellular solute-binding protein  28.79 
 
 
266 aa  79  0.00000000000008  Burkholderia ambifaria AMMD  Bacteria  normal  0.0588118  n/a   
 
 
-
 
NC_013173  Dbac_2367  extracellular solute-binding protein family 3  30.77 
 
 
246 aa  79  0.00000000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_24310  periplasmic component of amino acid ABC-type transporter/signal transduction system  27.27 
 
 
264 aa  79  0.00000000000009  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.268105  normal 
 
 
-
 
NC_009512  Pput_0242  cystine transporter subunit  30.8 
 
 
264 aa  79  0.00000000000009  Pseudomonas putida F1  Bacteria  normal  normal  0.310723 
 
 
-
 
NC_002947  PP_0227  cystine transporter subunit  30.8 
 
 
264 aa  78.6  0.0000000000001  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00670463 
 
 
-
 
NC_007347  Reut_A1594  extracellular solute-binding protein  31.16 
 
 
252 aa  78.6  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.854968  n/a   
 
 
-
 
NC_007963  Csal_3298  extracellular solute-binding protein  27.87 
 
 
254 aa  77.8  0.0000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C1295  polar amino acid ABC transporter periplasmic ligand-binding protein  27.97 
 
 
267 aa  77  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.397869 
 
 
-
 
NC_008025  Dgeo_2189  extracellular solute-binding protein  27.94 
 
 
272 aa  77.4  0.0000000000003  Deinococcus geothermalis DSM 11300  Bacteria  decreased coverage  0.000000925831  normal  0.633226 
 
 
-
 
NC_010552  BamMC406_4772  extracellular solute-binding protein  29.1 
 
 
266 aa  77.4  0.0000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4985  cystine transporter subunit  30.8 
 
 
264 aa  77  0.0000000000003  Pseudomonas putida W619  Bacteria  normal  normal  0.916643 
 
 
-
 
NC_007347  Reut_A2588  extracellular solute-binding protein  31.84 
 
 
270 aa  76.6  0.0000000000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2306  extracellular solute-binding protein  31.9 
 
 
246 aa  76.6  0.0000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000000079937  n/a   
 
 
-
 
NC_009616  Tmel_0470  extracellular solute-binding protein  30.22 
 
 
247 aa  76.6  0.0000000000004  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3010  extracellular solute-binding protein  29.34 
 
 
294 aa  76.6  0.0000000000004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2649  extracellular solute-binding protein  28.4 
 
 
266 aa  76.3  0.0000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1051  extracellular solute-binding protein family 3  30.83 
 
 
257 aa  76.3  0.0000000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.310082  n/a   
 
 
-
 
NC_008542  Bcen2424_0458  extracellular solute-binding protein  28.4 
 
 
266 aa  76.3  0.0000000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.357598  n/a   
 
 
-
 
NC_007948  Bpro_1040  extracellular solute-binding protein  30.56 
 
 
249 aa  75.9  0.0000000000006  Polaromonas sp. JS666  Bacteria  normal  normal  0.0410821 
 
 
-
 
NC_007510  Bcep18194_A3548  ABC amino acid transporter, periplasmic ligand binding protein  28.4 
 
 
266 aa  75.9  0.0000000000007  Burkholderia sp. 383  Bacteria  normal  normal  0.233102 
 
 
-
 
NC_002939  GSU3406  amino acid ABC transporter, periplasmic amino acid-binding protein  31.73 
 
 
251 aa  75.5  0.0000000000008  Geobacter sulfurreducens PCA  Bacteria  normal  0.940811  n/a   
 
 
-
 
NC_009654  Mmwyl1_4039  extracellular solute-binding protein  29.39 
 
 
262 aa  75.9  0.0000000000008  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0468  extracellular solute-binding protein  30.21 
 
 
260 aa  75.1  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000361301  n/a   
 
 
-
 
NC_010424  Daud_1135  extracellular solute-binding protein  32.2 
 
 
268 aa  75.1  0.000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0567537  n/a   
 
 
-
 
NC_008025  Dgeo_1060  extracellular solute-binding protein  33.5 
 
 
252 aa  75.1  0.000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.703174  normal 
 
 
-
 
NC_010508  Bcenmc03_0433  extracellular solute-binding protein  28.02 
 
 
266 aa  74.7  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0980273  hitchhiker  0.00000000179971 
 
 
-
 
NC_008346  Swol_1070  glutamine ABC transporter, glutamine-binding protein  30.45 
 
 
263 aa  74.7  0.000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.623597  n/a   
 
 
-
 
NC_009253  Dred_0727  extracellular solute-binding protein  31.82 
 
 
264 aa  73.9  0.000000000003  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00114827  n/a   
 
 
-
 
NC_011830  Dhaf_4752  extracellular solute-binding protein family 3  28.7 
 
 
269 aa  73.9  0.000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000170582  n/a   
 
 
-
 
NC_010084  Bmul_0351  extracellular solute-binding protein  28.02 
 
 
266 aa  73.9  0.000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3508  extracellular solute-binding protein family 3  28.98 
 
 
319 aa  73.2  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0687  extracellular solute-binding protein  31.45 
 
 
265 aa  72.8  0.000000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0413327  n/a   
 
 
-
 
NC_011884  Cyan7425_3922  extracellular solute-binding protein family 3  25 
 
 
282 aa  72.8  0.000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.998829  normal  0.0650452 
 
 
-
 
NC_008740  Maqu_3308  extracellular solute-binding protein  30.12 
 
 
248 aa  72.4  0.000000000008  Marinobacter aquaeolei VT8  Bacteria  normal  0.944301  n/a   
 
 
-
 
NC_013411  GYMC61_3517  extracellular solute-binding protein family 3  28.05 
 
 
273 aa  72  0.000000000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_0237  extracellular solute-binding protein family 3  29.71 
 
 
267 aa  72  0.000000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.640745  normal 
 
 
-
 
NC_013173  Dbac_1459  extracellular solute-binding protein family 3  31.39 
 
 
246 aa  72  0.00000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5481  extracellular solute-binding protein  28.17 
 
 
270 aa  71.6  0.00000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0589  extracellular solute-binding protein family 3  31.1 
 
 
247 aa  72  0.00000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0251025  n/a   
 
 
-
 
NC_007952  Bxe_B2050  polar amino acid ABC transporter periplasmic ligand-binding protein  28.34 
 
 
251 aa  71.6  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.0241787  normal  0.446872 
 
 
-
 
NC_008025  Dgeo_1986  extracellular solute-binding protein  27.76 
 
 
253 aa  72  0.00000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.647291  normal 
 
 
-
 
NC_009253  Dred_0771  extracellular solute-binding protein  27.8 
 
 
264 aa  71.6  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000484393  n/a   
 
 
-
 
NC_009832  Spro_2936  cystine transporter subunit  26.79 
 
 
265 aa  70.9  0.00000000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1942  extracellular solute-binding protein family 3  28.57 
 
 
266 aa  71.6  0.00000000002  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.0000237139  n/a   
 
 
-
 
NC_009972  Haur_2760  extracellular solute-binding protein  29.61 
 
 
277 aa  70.9  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2287  extracellular solute-binding protein family 3  32.88 
 
 
248 aa  70.9  0.00000000002  Geobacter sp. M21  Bacteria  n/a    decreased coverage  0.0000000177355 
 
 
-
 
NC_012791  Vapar_0161  extracellular solute-binding protein family 3  30.33 
 
 
246 aa  70.5  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  0.377397  n/a   
 
 
-
 
NC_003296  RS00359  substrate-binding periplasmic (PBP) ABC transporter protein  29.58 
 
 
255 aa  70.1  0.00000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.580904  normal 
 
 
-
 
NC_014150  Bmur_2352  extracellular solute-binding protein family 3  26.06 
 
 
275 aa  70.1  0.00000000004  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  2.9341599999999998e-21  n/a   
 
 
-
 
NC_009832  Spro_1655  cationic amino acid ABC transporter, periplasmic binding protein  30.48 
 
 
243 aa  70.1  0.00000000004  Serratia proteamaculans 568  Bacteria  normal  normal  0.568539 
 
 
-
 
NC_007492  Pfl01_0244  cystine transporter subunit  32 
 
 
266 aa  70.1  0.00000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.136857  normal  0.712908 
 
 
-
 
NC_011094  SeSA_A4620  arginine-binding periplasmic protein 2  27.62 
 
 
246 aa  69.7  0.00000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.370137  normal 
 
 
-
 
NC_013385  Adeg_2053  extracellular solute-binding protein family 3  30.28 
 
 
271 aa  69.7  0.00000000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1930  extracellular solute-binding protein family 3  32.88 
 
 
248 aa  69.7  0.00000000006  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000351018  n/a   
 
 
-
 
NC_011369  Rleg2_3756  extracellular solute-binding protein family 3  31.22 
 
 
265 aa  69.3  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.720347  normal  0.831757 
 
 
-
 
NC_013223  Dret_2490  extracellular solute-binding protein family 3  28.36 
 
 
273 aa  69.3  0.00000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0395  extracellular solute-binding protein  29.46 
 
 
267 aa  69.3  0.00000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2062  polar amino acid ABC transporter, inner membrane subunit  27.6 
 
 
499 aa  69.3  0.00000000007  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_2062  glutamine-binding periplasmic protein of glutamine ABC transporter  26.57 
 
 
502 aa  69.3  0.00000000007  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2350  His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease  26.57 
 
 
502 aa  68.9  0.00000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  0.140877  n/a   
 
 
-
 
NC_013947  Snas_0592  extracellular solute-binding protein family 3  26.99 
 
 
272 aa  68.9  0.00000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0945  amino acid ABC transporter, amino acid-binding protein  30.39 
 
 
265 aa  68.9  0.0000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.336039  n/a   
 
 
-
 
NC_010681  Bphyt_1729  extracellular solute-binding protein family 3  27.31 
 
 
264 aa  68.2  0.0000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp0553  hypothetical protein  30.29 
 
 
244 aa  68.2  0.0000000001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_0855  amino acid ABC transporter amino acid-binding protein  30.04 
 
 
265 aa  68.6  0.0000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
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