| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2062 |
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| Symbol | |
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| ID | 6975489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2286764 |
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| End bp | 2288263 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643391592 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002276437 |
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| Protein GI | 209544208 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGT TTGTCGCATT GCTGCTGCTG GCGGCGGTCA TGGTGGGACA TGCCCATGCC
GCGCCGCTGC GCTGGGCGTC GGATGCCGAG GCGAACGTGC CGTTCGTCTT CCACGACCCC
GCCGACCAGT CCCGCCTGAC CGGTTACGAA TACGACATCG CCCAGGCCAT CGCCCGCCGT
CTCGGCCGTC CGACCCAATT CGTGCAGAAC GACTGGGACG GGCTGATTCC CGGCCTGCAG
CGCGGGCTGT ACGACATGGT CATCGACGGG ATCGAGATCA CGCCCGAGCA TGAACAGGGC
GTGCTGTTCA GCCATCCCTA TTACGTCACG TCGGAACGCA TCACCGTCCG CCGCGACCAG
CAGGGGCTCG ATACGCTGGC GGCGCTGCGC GGGCATGTCG TCGGCACGCT GAAGGACACC
ACGGCCGAAC GCATGCTGCA GGCCGACCCC ACGATTCGCA TCCGATCGTA CGAGGAAGAA
ACCAACGCCT ACACCGACCT GAAGAACGGC CGGCTGGATG CGGTGCTGCT GGACGGCACC
ATCGCGCTCT ATTACGGCGC GCCCGATCCG GGGCTGAAGC TGGTGGGGGA CCCGATCGGC
CGGGTGGCCT ACGGCGTCGC CTTCGCCCAG GGGAACACCA CGCTGCGCGA CCAGGTGAAT
ACGGCGCTGG ACGGCATGAT CCGCGACGGC GAACTGCACC GGATCCTCGC GCGCTGGAAC
CTGTGGACGC CTGCCATGGC GGACCTGACC ATGGATGCGA CCACGCCCGA TATCGCGCCG
GACGCATGGC GGCATTACAT GGCGGCCACT GCCCCCGCCA CGGGCTGGCG CGCGCGGGTG
GACCGGTATG TCAGCTTCCT GCCGCTGCTG CTGCATGGCG CGGTACTGAC GCTCGCGGTG
TCGGCCTGCG CCATGGTGGT GGCGGTCGGG CTGGGGCTGG CCCTGGCGCT GCTGCGGCGG
TATGGGCCGC GCTGGCTGGG GGCGCTGGCG ACGCTGTATG TCGAAATCGT GCGCGGCACC
CCGCTGCTGA TCCAGATCCT GTTCATCTTC TATGCCCTGC CGGGCATCGG GCTGCGCCTG
TCGCCCTTCG TGGCCGGCGT CGTGGCCCTG GGCATGAATT ACGCGGCCTA CGAGGCCGAG
AATTACCGCG CCGGCCTGCA ATCCGTCGCA CGCGGCCAGG TCGAGGCCGC GCTGGCCCTG
AACATGACCC ACATGCAGGC CCTGCGCTTC GTGGTGGTGC CGCAGGCGGT GCGCATGGTC
ATCCCGGTGA TGACCAACGA TTTCATCTCG CTGCTGAAGG ACTCGTCGCT GGTCAGCGTG
ATCACGCTGA CCGAACTCAG CCAGACCTAT GTGCGGTTGT CCTCGACCTA TTACGATTAT
TTCGGCACCG GCCTGCTGAT CGGTACCGCC TACCTGCTGC TGGGCCTGCC CTTCGTGCGC
TTGGCCCGCA TGGCCGAAGC CCGGTTCCAG GCCGGGCAGC GCCGCCGGGG CCATATTTGA
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| Protein sequence | MRLFVALLLL AAVMVGHAHA APLRWASDAE ANVPFVFHDP ADQSRLTGYE YDIAQAIARR
LGRPTQFVQN DWDGLIPGLQ RGLYDMVIDG IEITPEHEQG VLFSHPYYVT SERITVRRDQ
QGLDTLAALR GHVVGTLKDT TAERMLQADP TIRIRSYEEE TNAYTDLKNG RLDAVLLDGT
IALYYGAPDP GLKLVGDPIG RVAYGVAFAQ GNTTLRDQVN TALDGMIRDG ELHRILARWN
LWTPAMADLT MDATTPDIAP DAWRHYMAAT APATGWRARV DRYVSFLPLL LHGAVLTLAV
SACAMVVAVG LGLALALLRR YGPRWLGALA TLYVEIVRGT PLLIQILFIF YALPGIGLRL
SPFVAGVVAL GMNYAAYEAE NYRAGLQSVA RGQVEAALAL NMTHMQALRF VVVPQAVRMV
IPVMTNDFIS LLKDSSLVSV ITLTELSQTY VRLSSTYYDY FGTGLLIGTA YLLLGLPFVR
LARMAEARFQ AGQRRRGHI
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