Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1070 |
Symbol | |
ID | 4281559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1219082 |
End bp | 1219873 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638137939 |
Product | glutamine ABC transporter, glutamine-binding protein |
Protein accession | YP_753751 |
Protein GI | 114566597 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.623597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT GGATCAAAGT ACTTATGGTA GGATTATTAA TTACCGGCCT ATTGGTAACT GTAATCGGTT GTAAAGCGCA GCAGAACAAC AATGACAGCG CTCAAGAAAG CCAAAAGGGA AAGCTAATTG TTGGTACCGA AGCTACCTTC CCACCCTTTG AAATGATAAA AGATGGCGAG TATAGTGGAT TTGATATGGA CATCATAAGG GCTATCGGGA AAAGCCAGGG TTATGAAGTT GAGATTAAGA ACCTTGGTTT TGATGCTCTG ATACCCGCCG TTCAAAGCGG TAATATTGAT TGTGTTATAG CTGCGGTTAC TATTGATGAG GACCGAGCTA AAGTTGTGGA CTTTAGCCAA CCCTATTTCG ATGCTGGGCT TATAATTGCG GTAAAGCAAG AGACTACCGG TATTACTACT ACCAAAGACC TGCAAGGCAA GAGAATTGCT GCCCAGGTGG GAACTACCGG TGCCGATACC TGCCTGAAAA TAAAGGATAA AGACCCCAGT ACTAATGTGA AGATTTTCGA ATCCGTAGGT GAAGCCTTTA TGGAACTACA GAAGGGCGGG GTAGATGCGG TTATTAATGA CCATCCGGTT ACTGCTGATT ACATTAAGAC CAGTGGTAAT GATTCCGTAA AAATGGTGGG TGAAGTCTTT AGTGCTGATA GCCAGTATGG TATTGCCGTA AAGAAAGGAA ACAGCAAGCT CCTTAACGAT ATCAACGCGG GCCTTGACGA ACTTAAAGCC AGTGGCGAAT ACGAACAGAT TTATAAGAAA TGGTTTGATT AA
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Protein sequence | MKKWIKVLMV GLLITGLLVT VIGCKAQQNN NDSAQESQKG KLIVGTEATF PPFEMIKDGE YSGFDMDIIR AIGKSQGYEV EIKNLGFDAL IPAVQSGNID CVIAAVTIDE DRAKVVDFSQ PYFDAGLIIA VKQETTGITT TKDLQGKRIA AQVGTTGADT CLKIKDKDPS TNVKIFESVG EAFMELQKGG VDAVINDHPV TADYIKTSGN DSVKMVGEVF SADSQYGIAV KKGNSKLLND INAGLDELKA SGEYEQIYKK WFD
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