Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2760 |
Symbol | |
ID | 5734641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3514174 |
End bp | 3515007 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641279903 |
Product | extracellular solute-binding protein |
Protein accession | YP_001545526 |
Protein GI | 159899279 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCC TCAATGTTGT GGCTCTGTTG AGCTTACTGT TGGTTGTGCT GGGCGCATGT GGCGCAGAGT CAGCAACTCC AACAACTGCT CCAACAACCG CTTCGACCAC CGCTCCCGTC GCTGGCAAGA TCGATCTTGC TGGCCGTGAA GTCAGCATCG CCGTCGAAAA CTTGTACCCA CCATTCAACT ACATCAACCC GCAAACGGGC AAAGGCGAAG GCTGGGATTA CGATGCTTGG ACAGCGATTT GTGCTGAGTT GAACTGTAAA CCAGTTTTCA AAGAAACCTC ATGGGAAGGC ATGATCCAAG CGGTTGGCAA TGGTCAATTC GACGCTGCTG CCGATGGGAT CACGATCACG CCTGAACGAG CTGAGCAAGT GGCTTTCTCC GATGGCTATA TTCAAATTAG CCAACGCCTG TTGGTGCGCA ACGATGAAAC TCGTTTCACC AGCATGGACG AATTCGCCAA AACTGAATTC CGCTTAGGCA CGCAAACTGG CACCAGCAAC TACGAAACCG CCAAAGGTTT GCTCGATGAA GCCCGCATCC AAGGTTTTGA AACCTTCCCA TTTGCGGTAG CCGCCTTGAT CAACGGCGAC GTTGACGCGG TGATTATGGA CGAAACCGCT GGCCAAGGCT ATGTTGGCAA CAACAGCGAC CAATTGAAGC TGGTTGGCGA CCCAATCAAG AGCGATCAAT TGGGCTTTAT TTTTCCAAAG AACAGCGATT TGGTTGAGCC AGTGAATGCC GCCCTCAAGG CGCTGCGCGA AAATGGCAAG CTAGCTGAGC TTGAAAAGAA ATATTTCGGC CCTGATTTCA AATTGCCCGA ATAA
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Protein sequence | MKRLNVVALL SLLLVVLGAC GAESATPTTA PTTASTTAPV AGKIDLAGRE VSIAVENLYP PFNYINPQTG KGEGWDYDAW TAICAELNCK PVFKETSWEG MIQAVGNGQF DAAADGITIT PERAEQVAFS DGYIQISQRL LVRNDETRFT SMDEFAKTEF RLGTQTGTSN YETAKGLLDE ARIQGFETFP FAVAALINGD VDAVIMDETA GQGYVGNNSD QLKLVGDPIK SDQLGFIFPK NSDLVEPVNA ALKALRENGK LAELEKKYFG PDFKLPE
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