Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0771 |
Symbol | |
ID | 4955382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 826695 |
End bp | 827489 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640179944 |
Product | extracellular solute-binding protein |
Protein accession | YP_001112134 |
Protein GI | 134298638 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000484393 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGGA TATTTAAGAC TGTTTTAACT GGCTTAACGA TCCTGGCATT GGCCTTAGTT GCAGTGGGCT GCACAGGGAA AGAAGAAGCC AAATCACCGG CACAGGATAC TGGTAAGAAG AAACTGGTGG CTGCTGCGGA TGCTACCTTT GCCCCCTTTG AATTTACCGA TTCCAGTGGA AAGTATGTAG GTTTTGATTT AGACTTAATT GCAGCCATTG CAGAAGAAAT GGGCTATGAA TTAGAGTTCC AGAGTATTGC TTTTGACGGT ATAATTCCTG CCTTGCAAAG TAGCCAGATT GATTGTGCGG CCACAGCCAT GACCATTACC CCCGAACGTT CAAAGGCTGT TAATTTTAGT GATCCCTATT ATAAGGCTGG TCAAATTGTT GTTGTAAAAA CCGAGAACAA TGATATTAAG GGTGTTAATG ATTTAAAAGG CAAAACAATT GCCGTACAAA GTGGTACCAC AGGTGCAATG GAAGCTGAAA AGGCCACTGA CAAGAAGAAA GTTATCTACT TTACTGGTGC TGACCAGGCC CTTCAGGAGT TGAAAAATGG CGCTGCCAAT GCGGTAATAA TTGACTACCC GGTTGCAGCT TATTTCATTC AGCAAGGTAA CAAGGATGTT AAACTTGTAG GCGATATCAT GTCCGCTGAA GAGTATGGCA TTGCTGTTCC TAAGGACAAG GAGCAGATTT TAGCTGATGT AAATGCTGGT CTAAAAAAGA TCAAAGAAAA CGGTAAGTAT GCAGAAATCT ATAAAAAATG GTTTGGCGAA GAACCCAGAA GTTAA
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Protein sequence | MKRIFKTVLT GLTILALALV AVGCTGKEEA KSPAQDTGKK KLVAAADATF APFEFTDSSG KYVGFDLDLI AAIAEEMGYE LEFQSIAFDG IIPALQSSQI DCAATAMTIT PERSKAVNFS DPYYKAGQIV VVKTENNDIK GVNDLKGKTI AVQSGTTGAM EAEKATDKKK VIYFTGADQA LQELKNGAAN AVIIDYPVAA YFIQQGNKDV KLVGDIMSAE EYGIAVPKDK EQILADVNAG LKKIKENGKY AEIYKKWFGE EPRS
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