Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0727 |
Symbol | |
ID | 4957435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 781313 |
End bp | 782107 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640179901 |
Product | extracellular solute-binding protein |
Protein accession | YP_001112091 |
Protein GI | 134298595 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00114827 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA CTTTAAAGTT TGTTTTACTG GCCGTATTGG TTCTGGCTTT GGCAGTTGCT GCAGTGGGTT GCGACGGCAG TGAACCTACC AAAGAACAAG CCAAGGATGC TGCTAAGCCC AAACTAATTG CAGCAGCCGA TGCTACCTTT GCGCCCTTTG AATTTACCGA CCCCAAAACG GGTAAATATG TTGGCTTTGA TGTTGAATTA ATCCAAGCTC TTTGTGATGA AGCTGGATAT GAACTGGAAT TTCGCAGCAT GGGTTTTGAT GGTCTAATTG CTGCCCTACA AGCCAATCAA ATTGATGCAG CTGTTTCGGC TATGACTATT ACAGATGAAC GTAAAAAGGA AGTAGACTTT TCCGATCCCT ATTATAAGTC CGGTCTTGTT GTTGCTGTTC AGGCAAAAGA TACAGAAATT AAAGGCTTTG AAGATTTAAA AGGGAAGAAG ATCGCTGTGC AAAGTGGTAC CACCGGTGCT TTGCAGGCTG AAAAGATCAC AGATAAAGAC AAGATCACTT ACTTTACCAA TGCAGATCAG GCTCTATTAG AACTTAAAAA CGGTGCTGTG GATGCAGTGG TCAATGACTT TCCTGTAAGC GCATATTTTA TACAGCAGGG TAATAAAGAG GTAAAAATGG TAGGTGAAAT TCTTTCAGCA GAAGAATATG GAATTGCTGT TCCCAAGGGA AAAACTGAGA CGGTGGAAAA ATTAAATGCT GCTCTGAAAA AAATAAAGGA AAATGGTAAG TATGATCAAA TTTACAAGAA GTGGTTTGGC GAAGAACCAA AATAA
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Protein sequence | MKKTLKFVLL AVLVLALAVA AVGCDGSEPT KEQAKDAAKP KLIAAADATF APFEFTDPKT GKYVGFDVEL IQALCDEAGY ELEFRSMGFD GLIAALQANQ IDAAVSAMTI TDERKKEVDF SDPYYKSGLV VAVQAKDTEI KGFEDLKGKK IAVQSGTTGA LQAEKITDKD KITYFTNADQ ALLELKNGAV DAVVNDFPVS AYFIQQGNKE VKMVGEILSA EEYGIAVPKG KTETVEKLNA ALKKIKENGK YDQIYKKWFG EEPK
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