| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0727 |
|---|
| Symbol | |
|---|
| ID | 4957435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 781313 |
|---|
| End bp | 782107 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640179901 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001112091 |
|---|
| Protein GI | 134298595 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00114827 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA CTTTAAAGTT TGTTTTACTG GCCGTATTGG TTCTGGCTTT GGCAGTTGCT
GCAGTGGGTT GCGACGGCAG TGAACCTACC AAAGAACAAG CCAAGGATGC TGCTAAGCCC
AAACTAATTG CAGCAGCCGA TGCTACCTTT GCGCCCTTTG AATTTACCGA CCCCAAAACG
GGTAAATATG TTGGCTTTGA TGTTGAATTA ATCCAAGCTC TTTGTGATGA AGCTGGATAT
GAACTGGAAT TTCGCAGCAT GGGTTTTGAT GGTCTAATTG CTGCCCTACA AGCCAATCAA
ATTGATGCAG CTGTTTCGGC TATGACTATT ACAGATGAAC GTAAAAAGGA AGTAGACTTT
TCCGATCCCT ATTATAAGTC CGGTCTTGTT GTTGCTGTTC AGGCAAAAGA TACAGAAATT
AAAGGCTTTG AAGATTTAAA AGGGAAGAAG ATCGCTGTGC AAAGTGGTAC CACCGGTGCT
TTGCAGGCTG AAAAGATCAC AGATAAAGAC AAGATCACTT ACTTTACCAA TGCAGATCAG
GCTCTATTAG AACTTAAAAA CGGTGCTGTG GATGCAGTGG TCAATGACTT TCCTGTAAGC
GCATATTTTA TACAGCAGGG TAATAAAGAG GTAAAAATGG TAGGTGAAAT TCTTTCAGCA
GAAGAATATG GAATTGCTGT TCCCAAGGGA AAAACTGAGA CGGTGGAAAA ATTAAATGCT
GCTCTGAAAA AAATAAAGGA AAATGGTAAG TATGATCAAA TTTACAAGAA GTGGTTTGGC
GAAGAACCAA AATAA
|
|---|
| Protein sequence | MKKTLKFVLL AVLVLALAVA AVGCDGSEPT KEQAKDAAKP KLIAAADATF APFEFTDPKT
GKYVGFDVEL IQALCDEAGY ELEFRSMGFD GLIAALQANQ IDAAVSAMTI TDERKKEVDF
SDPYYKSGLV VAVQAKDTEI KGFEDLKGKK IAVQSGTTGA LQAEKITDKD KITYFTNADQ
ALLELKNGAV DAVVNDFPVS AYFIQQGNKE VKMVGEILSA EEYGIAVPKG KTETVEKLNA
ALKKIKENGK YDQIYKKWFG EEPK
|
|---|
| |