| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38840 |
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| Symbol | |
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| ID | 8389205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4203723 |
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| End bp | 4204541 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644977894 |
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| Product | periplasmic component of amino acid ABC-type transporter/signal transduction system |
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| Protein accession | YP_003135653 |
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| Protein GI | 257057821 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.621896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGTC GACTCACAAG GGCGCTGACC CTGCTGCCAG CCTTCGCCCT CGCCATCACG
GCGACAAGCT GCGCGGAGGA AGTCAACACC GGCGGAGACA GCGAGGCCGG TGGCGAGATC
ACCCTGGTCA ACGAGGGCAA GTTGACCACC TGCACCCACC TGCCCTACAA GCCGTTCCAG
TTCACCGAGA ACGGCAAGAC GGTGGGCTTC GACGTCGATC TCGTGGACCT CGTCGCCGAG
GAACTCGGTG TCGAGCAGGA GGTCTTCGAC ACCTCCTTCG AAAGCATCGA GTCCGGTGCG
GCGCTGGACA CCGGTCAATG CGACCTCGCC GCGGCGGGGA TGAGCATCAC CGACGTCCGT
AAGAAGGTCA TGGACTTCTC CGAGGGCTAC TACGACGCCA ATCAGGCCCT GTTGGTGAAG
AAGGGTTCCG ACATCTCCGA CCTGTCAGAT CTGAAGGGCA AGGTGCTCGG CGTCCAACTC
GGCACCACCG GTGAGAAGTA CGCCGAGGAG CACAAGGAGG AGTTCGGTTA CACCACCCGG
CAGTTCGAGG ACCTCGCACT GCTGCAGACG GCGGTGAAGA CGGGCCAGGT GGCGGCCGGT
ATCAACGACA ACAGCGTGTT CTACGACTAC GTCAAGAACA ACTCGGACGT CGAGGTCACC
GCGGAGTTCG AGACGGGCGA GGAGTACGGC ATCGCCGTCC GCAAGGGCAA CGGCGCATTG
CTCGCCAAGA TCAACGAAGT GTTGGACGCC GCGAAGAGCG ACGGCCGATA CGACGAGATC
TACGAGAAGT GGTTCGGCCA GAAGCCGGAG ACCAAATGA
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| Protein sequence | MARRLTRALT LLPAFALAIT ATSCAEEVNT GGDSEAGGEI TLVNEGKLTT CTHLPYKPFQ
FTENGKTVGF DVDLVDLVAE ELGVEQEVFD TSFESIESGA ALDTGQCDLA AAGMSITDVR
KKVMDFSEGY YDANQALLVK KGSDISDLSD LKGKVLGVQL GTTGEKYAEE HKEEFGYTTR
QFEDLALLQT AVKTGQVAAG INDNSVFYDY VKNNSDVEVT AEFETGEEYG IAVRKGNGAL
LAKINEVLDA AKSDGRYDEI YEKWFGQKPE TK
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