| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0875 |
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| Symbol | hisJ4 |
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| ID | 6362847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1003120 |
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| End bp | 1003983 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642680042 |
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| Product | amino acid ABC transporter/signal transduction systems periplasmic protein |
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| Protein accession | YP_001954819 |
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| Protein GI | 189439738 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00496425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAATA AGCGACACAT CGTCCGTACC ATTGCGGCCA CCGTCAGCAT CCTGGCTCTG
TCGTTCACCG CAGCCTGCGG TTCCGGCCAG TCCACCGCAT CCAATTCCAC CGATTCGGAC
GACATCACCC AGCAGACGTA CAAGCCGGGC AAGCTGACCA TCGCCACCGG ACAGCCGGCC
TACGAGCCGT GGGTTATGAA CGACAAGCCG GAAAGCGGTG AGGGCTACGA GGCGGCCGTC
GCCTACGCAG TGGCCGACAA GCTCGGTTTC AAGAAGAGCG ACGTGGTGTG GACCCGCACC
GCATTCGACA CCGCCATCGC TCCCGGCGCC AAGGACTGGG ATTTCAACAT CCAGCAGTTC
GGCATCACCG ACGAGCGCAA GAAGGCCGTT GACTTCTCGT CCAGCTACTA CAACGACAGC
CAGTCCGTCG TGGTCAAGAA AGACAGCAAG TTCGCCAACG CCACCAAGGT ATCCGATCTG
AAGGATGCGA CCGTGGGCGT CATGGTCGGC ACCCTTGCCT ACGACTACGC CAAGGCGAAC
ATCAAGGACG ACATCCAGAC GTTCAATGAT GATGCCGCAC TGGCTCAGGC ACTTGACGCC
GGTCAGATCG ACGCACTGGT CACCAGCACC GTGGAATGCG TGTACATGGT GCAGTCCGAG
CAGGTCAAGG ACTCCAAGGT GCTCGGCCGT CTGCCTGACT CCGAAGACAA GAGCGGCATG
GGCATCGTGC TGCCGAAGGA TTCCAAGCTG ACTGCAGCCG TGACCAAGGC AGTGGATGAC
CTGAACGCCG ACGGCACCAT CAAGAAGCTT CAGGACAAGT GGCTGGCCGA GTACACCACC
GACCTGACCG AACTGAAGAA GTAA
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| Protein sequence | MFNKRHIVRT IAATVSILAL SFTAACGSGQ STASNSTDSD DITQQTYKPG KLTIATGQPA
YEPWVMNDKP ESGEGYEAAV AYAVADKLGF KKSDVVWTRT AFDTAIAPGA KDWDFNIQQF
GITDERKKAV DFSSSYYNDS QSVVVKKDSK FANATKVSDL KDATVGVMVG TLAYDYAKAN
IKDDIQTFND DAALAQALDA GQIDALVTST VECVYMVQSE QVKDSKVLGR LPDSEDKSGM
GIVLPKDSKL TAAVTKAVDD LNADGTIKKL QDKWLAEYTT DLTELKK
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