Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0661 |
Symbol | |
ID | 8878739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 642763 |
End bp | 643602 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003506448 |
Protein GI | 291295050 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000289878 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGAA TCGGGATTCT AGGACTGGCG GTTCTGGCCT CGCTGGGGAT GGCCCAGACC AAAATTGGTA ACTGCGAGGT CACCGGTCCC AAAGGCCAGT TCCCCATCCG CCCGGCGGTG GCCGGCCAGC TTACGGTGCA GACCAACCTG CCGGGGCCGG GCTTCTGGAA TGGCGACAGC CCCGCCACCA TCAAGGACGG CTTCGAGTAC TGCCTGGCCG CCAACATCGC CCACCGCGCA GGGCTGGATA AAGTGGTGGT GCAGAACGTG GCCTGGGATG CCCTGATTGC CGGCCAGACC CGCAACTTCG ACTTTGCTCT CTCACAGATC ACCATCACCG AGGCCCGCAA GCGGGTGGTG GACTTCTCGA GGCCCTACTT CTCCTCGGAT ATCGGCGTGC TGGTGCGGGC GGCTGATAAG GCCAAATTTA ACTCCCCGGC CAGCCTCAAG ACCGCCCGCC TGGGTGTGCA GCAGGCCACC ACGGCGGCCA AGTTCCTGAG CGAGACCCTC AAGCACCCCC AGAACCTGAC CCGGGTCTTT CCGGATGTGG CAGCGGGCTT CACGGCCTTG CGGGCCGGTC AGATCGATGC CTTCATCATC GACACCTCTA TTGTGCTCTC GGAGGCGGCC AAGTCGGGTG GGGCCCTGGT GGTGGTGGGT CAGTTTAGCA CCGGCGAAAA TTACGGTGCA CTCTTTACCA AAGGGAACCC CAACCGAGCC CAGATTGACA AGATTTTGGA GGCCCTGGAG AAAGACGGCA CGCTCAAGAA ACTATCCCAG ACCTACCTGG CTAAGGAATG GGGGATTGAC CCCACCACGG TGCCGCTCTG GCGGCCCTAG
|
Protein sequence | MKRIGILGLA VLASLGMAQT KIGNCEVTGP KGQFPIRPAV AGQLTVQTNL PGPGFWNGDS PATIKDGFEY CLAANIAHRA GLDKVVVQNV AWDALIAGQT RNFDFALSQI TITEARKRVV DFSRPYFSSD IGVLVRAADK AKFNSPASLK TARLGVQQAT TAAKFLSETL KHPQNLTRVF PDVAAGFTAL RAGQIDAFII DTSIVLSEAA KSGGALVVVG QFSTGENYGA LFTKGNPNRA QIDKILEALE KDGTLKKLSQ TYLAKEWGID PTTVPLWRP
|
| |