| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1294 |
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| Symbol | |
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| ID | 8419123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1515904 |
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| End bp | 1516695 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037870 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003198160 |
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| Protein GI | 258405418 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0278324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.772509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAG CGATTCTATT TGTAAGCGCT CTGCTGTGTC TCTGCGTGGC GGCGACGGGC
TTTGCCGGCG ACGGATCCTG GGAACGGGTC CAGAAAAAAG GGGAATTGGT TATCGGGCTG
GATGACACCT TTGCTCCGAT GGGCTTTCGC AAGGACGACG GGACCCTGGT CGGGTTCGAC
GTCGACGCGG CCGAAGCTCT GGGTGAGCGC CTGGGTATCG ACATTGCCTG GCAGCCTACT
GCCTGGGACG GCGTGATCCA CTCCCTGAAC GCCAAGAAAT TCGACTGCAT CTGGAACGGC
ATGACCATCA CCGAGGAGCG GGCGGCAAAG GTGGACTTCA CCGAGCCCTA TATTATGGAT
GGGCAGATTG TCGTCGTCCA GTTTGAAAAC GATGCTGTCA CCGATTTCGC CGATCTCGGC
GGCACGACCG TGGGTGTGCA GAAAGGGTCC TCTGCCGTTG AAGCCGTGGA AGACCTGCCC
AAGGCTCCGG AGACAGTCAA GGAATATCCG AGCAACAATA ATGCGTTGCT CGATCTCGAA
GCCGGCCGTC TGGCGGCTGT CATCGTCGAT AATGTGGCTG GCCGCTACGC CATTGCCACC
CGCCCCGGCA CGTTCAAGGT CCTGCCCGGT TTCGTGACCA AAGAGCCGTT CGGGATCGCC
TTCCGCAAGG CTGACGACAG TCTGCGTATG AAAGTTCAAC AGGCCCTGGA CGCCATGGTT
GAAGACGGCA CCCTGGCCGA GATTTCCCGG AAATGGTTCG GTGAGGACAT CACCAACCCC
GCCAAATGGT AA
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| Protein sequence | MKKAILFVSA LLCLCVAATG FAGDGSWERV QKKGELVIGL DDTFAPMGFR KDDGTLVGFD
VDAAEALGER LGIDIAWQPT AWDGVIHSLN AKKFDCIWNG MTITEERAAK VDFTEPYIMD
GQIVVVQFEN DAVTDFADLG GTTVGVQKGS SAVEAVEDLP KAPETVKEYP SNNNALLDLE
AGRLAAVIVD NVAGRYAIAT RPGTFKVLPG FVTKEPFGIA FRKADDSLRM KVQQALDAMV
EDGTLAEISR KWFGEDITNP AKW
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