Gene Snas_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0592 
Symbol 
ID8881775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp622409 
End bp623227 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content61% 
IMG OID 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003509399 
Protein GI291298121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC CGAACTATGC GCGCCTGCTA GCCGTGGGCC TTGTCGTCGC GGTCGGTATG 
ACCGTCGCGG CCTGTGGCGG TGGAGCTGAG AAAACCAAGA CGCCCGGTGG CTACACGGTG
GAGCTCATCG ACGCCAAGAA GCTCACCGTC TGCACGAATA TTCCATACGT GCCTTTCCAG
TTCGAGAAGA ACGGGAAGAC GGTGGGTTTC GATGTGGACA TGGTTGACCT GGCCGCCGAT
GAACTCGGTG TGAAGCAGGA CGTCATCGAC GTCAAATGGG ACAACATCGA GAACGGTTCG
GCGCTGAGCG GCGGCAAGTG TGACCTGGCC GCGGCCGCCA TGACCATCAC GCCCGAGCGC
GAGAAGAACC TGACCTTCTC CGAGCCGTAC TTCGACGAGG TCATCGCGTT CGTGGCCCCC
AAGGGCAAGG CGCCCAAGTC CGTCGAGGAC GTCGGCGACC GGAAACTGGG CGTGCAGGCT
TCCACCACCA GCCTCGAGTA CGCCAAGAAG CACAAGCTGG AACCGCAGGA GTTCGAGGAC
TCGGCCAAGC AGCGCGCGGG CCTGGAGTCC GGCAAGGTCG AGGTCGTGCT TCAGGACTAC
CCGGTGATCA CCGAGTGGAT GAAGGACGAG AAGTTCGCCG CCAAGTACGA GGTCGGCCAG
ATCATCGAGA CCGGTTCCCA GTACGGGTTC GGCTTCAAGA AGAGCGCCGA CAAGACGCTG
GTGAAGGTCG TCAACGACCA GATCAAGAAG GCCAAGGACA GCAAGAAGTA CGACGAGCTT
TACAAGAAGT GGTTCGGCAC CGAGCCGAAA GCGTCATGA
 
Protein sequence
MIRPNYARLL AVGLVVAVGM TVAACGGGAE KTKTPGGYTV ELIDAKKLTV CTNIPYVPFQ 
FEKNGKTVGF DVDMVDLAAD ELGVKQDVID VKWDNIENGS ALSGGKCDLA AAAMTITPER
EKNLTFSEPY FDEVIAFVAP KGKAPKSVED VGDRKLGVQA STTSLEYAKK HKLEPQEFED
SAKQRAGLES GKVEVVLQDY PVITEWMKDE KFAAKYEVGQ IIETGSQYGF GFKKSADKTL
VKVVNDQIKK AKDSKKYDEL YKKWFGTEPK AS