Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1655 |
Symbol | |
ID | 5604097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1809821 |
End bp | 1810552 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640937187 |
Product | cationic amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001477887 |
Protein GI | 157369898 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.568539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TAATAATCGC CGCCGTTCTG GCCGGCATCA GCGTTTCCGC CTCTGCAGCC GAAACCATCC GTTTCGCTAC CGAAGCTTCT TATCCTCCAT TTGAATTTAT TGACGCCGGC AACAAGATCC AGGGCTTTGA TGTCGATCTG GCCAATGCGC TGTGTAAAGA GATGCAGGCC GAGTGTACCT TCACCAATCA GGCCTTTGAC AGCCTGATCC CAAGCCTGAA GTTCAAGCGC TTCGACGCGG TGATGGCCGG TATGGACATC ACGCCTGAGC GTGAAAAGCA GGTGCTGTTT ACCAAGCCGT ATTACGACAA CTCCGCGCTG TTTGTTGCCC AGAAAGGCAA AGTGGCTGAC GTCGCTGCGT TGAAAGGCAA GAAAGTGGGC GTGCAGAACG GCACCACTCA CCAGAAATAC CTGACCGATA AGCATCCGGA AATCACCACC GTGCCTTACG ACAGCTATCA GAACGCCATT CTGGATCTGA AAAATGGCCG CGTCGATGCG GTATTCGGTG ACACTGCGGT GGTCAACGAA TGGCTGAAAC AAAACGCGGC ACTGGCCGCC GTGGGCGACA AAGTGACCGA TAAAGACTAC TTCGGTACCG GCCTGGGCAT TGCCGTTCGC CAGAAAAATA CCGATCTGCA GGGCAAATTC AATGCCGCTC TGGACAAGAT CAAACAGGAT GGGACTTACG AAACCATCTA CAAAAAATGG TTCCAGCAGT AA
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Protein sequence | MKKLIIAAVL AGISVSASAA ETIRFATEAS YPPFEFIDAG NKIQGFDVDL ANALCKEMQA ECTFTNQAFD SLIPSLKFKR FDAVMAGMDI TPEREKQVLF TKPYYDNSAL FVAQKGKVAD VAALKGKKVG VQNGTTHQKY LTDKHPEITT VPYDSYQNAI LDLKNGRVDA VFGDTAVVNE WLKQNAALAA VGDKVTDKDY FGTGLGIAVR QKNTDLQGKF NAALDKIKQD GTYETIYKKW FQQ
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