Gene Spro_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1655 
Symbol 
ID5604097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1809821 
End bp1810552 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID640937187 
Productcationic amino acid ABC transporter, periplasmic binding protein 
Protein accessionYP_001477887 
Protein GI157369898 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.568539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TAATAATCGC CGCCGTTCTG GCCGGCATCA GCGTTTCCGC CTCTGCAGCC 
GAAACCATCC GTTTCGCTAC CGAAGCTTCT TATCCTCCAT TTGAATTTAT TGACGCCGGC
AACAAGATCC AGGGCTTTGA TGTCGATCTG GCCAATGCGC TGTGTAAAGA GATGCAGGCC
GAGTGTACCT TCACCAATCA GGCCTTTGAC AGCCTGATCC CAAGCCTGAA GTTCAAGCGC
TTCGACGCGG TGATGGCCGG TATGGACATC ACGCCTGAGC GTGAAAAGCA GGTGCTGTTT
ACCAAGCCGT ATTACGACAA CTCCGCGCTG TTTGTTGCCC AGAAAGGCAA AGTGGCTGAC
GTCGCTGCGT TGAAAGGCAA GAAAGTGGGC GTGCAGAACG GCACCACTCA CCAGAAATAC
CTGACCGATA AGCATCCGGA AATCACCACC GTGCCTTACG ACAGCTATCA GAACGCCATT
CTGGATCTGA AAAATGGCCG CGTCGATGCG GTATTCGGTG ACACTGCGGT GGTCAACGAA
TGGCTGAAAC AAAACGCGGC ACTGGCCGCC GTGGGCGACA AAGTGACCGA TAAAGACTAC
TTCGGTACCG GCCTGGGCAT TGCCGTTCGC CAGAAAAATA CCGATCTGCA GGGCAAATTC
AATGCCGCTC TGGACAAGAT CAAACAGGAT GGGACTTACG AAACCATCTA CAAAAAATGG
TTCCAGCAGT AA
 
Protein sequence
MKKLIIAAVL AGISVSASAA ETIRFATEAS YPPFEFIDAG NKIQGFDVDL ANALCKEMQA 
ECTFTNQAFD SLIPSLKFKR FDAVMAGMDI TPEREKQVLF TKPYYDNSAL FVAQKGKVAD
VAALKGKKVG VQNGTTHQKY LTDKHPEITT VPYDSYQNAI LDLKNGRVDA VFGDTAVVNE
WLKQNAALAA VGDKVTDKDY FGTGLGIAVR QKNTDLQGKF NAALDKIKQD GTYETIYKKW
FQQ