Gene BamMC406_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0382 
Symbol 
ID6178308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp429248 
End bp430048 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID641680126 
Productextracellular solute-binding protein 
Protein accessionYP_001807097 
Protein GI172059445 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT CGAAGTTTCT GCTGTCGGGG CTGCTGCTCG CGTCGGCCCT CGGTTTCACG 
GCCGTCGCCG CGCACGCGGA AGACCTGCTC GACTCGGTGA AGAAAGCCGG CGTGCTGCGC
GTCGGGCTCG AAGGCACGTA TCCGCCGTTC AACTCGCGCG GCACCTCGGG TCAGCTCGAG
GGTTTCGACG TCGACGTCGC GAATGCGGTC GCCGGCAAGC TCGGCGTGAA GACGCAGTTC
ATCCCGACCG AATGGAGCGG GATCATCGCG GGGCTGCAGG CCGGCAAGTT CGACGTGATC
GTCAACCAGG TCACGATCAC GCCGCAGCGC AAGGAAGTGC TCGACTTCAG CCAGCCGTAC
ACATATTCGG CCGCTCAGCT GATCCAGCGC AAGGACGACA CGCGCAACTT CAAGTCGCTC
GAGGATTTCA AGGGCAAGAA GCTCGGCGTG ACGCTCGGCA CCAACTACGA CCAGATGGCG
CGCAGCGTGC CGGGCATCGA GGTGCAGACG TATCCGGGTG CGCCGGAAAA GCTGCGCGAC
CTCGCCGCGG GCCGGATCGA GGCGACGCTC GACGACCGCC TGATGCTGCC GTACATGATC
AAGACGTCGA ACCTGCCGCT GCGCTCGGGC GCGGTGCTGA ACGGCGGCAA GCAGGAGATG
GCGATCCCGT TCCGCAAGGG CAATCCGAAG TTCGAGAAGG CGATCAACGA TGCGCTGGAT
TCGCTGCGCA AGGACGGCAC GTTGAAGAAG ATCTCGATGC ACTGGTTCGG CAGCGACGTG
ACGGTGCCGC TCGCGCAGTA A
 
Protein sequence
MKRSKFLLSG LLLASALGFT AVAAHAEDLL DSVKKAGVLR VGLEGTYPPF NSRGTSGQLE 
GFDVDVANAV AGKLGVKTQF IPTEWSGIIA GLQAGKFDVI VNQVTITPQR KEVLDFSQPY
TYSAAQLIQR KDDTRNFKSL EDFKGKKLGV TLGTNYDQMA RSVPGIEVQT YPGAPEKLRD
LAAGRIEATL DDRLMLPYMI KTSNLPLRSG AVLNGGKQEM AIPFRKGNPK FEKAINDALD
SLRKDGTLKK ISMHWFGSDV TVPLAQ