Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0382 |
Symbol | |
ID | 6178308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 429248 |
End bp | 430048 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680126 |
Product | extracellular solute-binding protein |
Protein accession | YP_001807097 |
Protein GI | 172059445 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT CGAAGTTTCT GCTGTCGGGG CTGCTGCTCG CGTCGGCCCT CGGTTTCACG GCCGTCGCCG CGCACGCGGA AGACCTGCTC GACTCGGTGA AGAAAGCCGG CGTGCTGCGC GTCGGGCTCG AAGGCACGTA TCCGCCGTTC AACTCGCGCG GCACCTCGGG TCAGCTCGAG GGTTTCGACG TCGACGTCGC GAATGCGGTC GCCGGCAAGC TCGGCGTGAA GACGCAGTTC ATCCCGACCG AATGGAGCGG GATCATCGCG GGGCTGCAGG CCGGCAAGTT CGACGTGATC GTCAACCAGG TCACGATCAC GCCGCAGCGC AAGGAAGTGC TCGACTTCAG CCAGCCGTAC ACATATTCGG CCGCTCAGCT GATCCAGCGC AAGGACGACA CGCGCAACTT CAAGTCGCTC GAGGATTTCA AGGGCAAGAA GCTCGGCGTG ACGCTCGGCA CCAACTACGA CCAGATGGCG CGCAGCGTGC CGGGCATCGA GGTGCAGACG TATCCGGGTG CGCCGGAAAA GCTGCGCGAC CTCGCCGCGG GCCGGATCGA GGCGACGCTC GACGACCGCC TGATGCTGCC GTACATGATC AAGACGTCGA ACCTGCCGCT GCGCTCGGGC GCGGTGCTGA ACGGCGGCAA GCAGGAGATG GCGATCCCGT TCCGCAAGGG CAATCCGAAG TTCGAGAAGG CGATCAACGA TGCGCTGGAT TCGCTGCGCA AGGACGGCAC GTTGAAGAAG ATCTCGATGC ACTGGTTCGG CAGCGACGTG ACGGTGCCGC TCGCGCAGTA A
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Protein sequence | MKRSKFLLSG LLLASALGFT AVAAHAEDLL DSVKKAGVLR VGLEGTYPPF NSRGTSGQLE GFDVDVANAV AGKLGVKTQF IPTEWSGIIA GLQAGKFDVI VNQVTITPQR KEVLDFSQPY TYSAAQLIQR KDDTRNFKSL EDFKGKKLGV TLGTNYDQMA RSVPGIEVQT YPGAPEKLRD LAAGRIEATL DDRLMLPYMI KTSNLPLRSG AVLNGGKQEM AIPFRKGNPK FEKAINDALD SLRKDGTLKK ISMHWFGSDV TVPLAQ
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