Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2062 |
Symbol | |
ID | 4205214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2283428 |
End bp | 2284936 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566612 |
Product | glutamine-binding periplasmic protein of glutamine ABC transporter |
Protein accession | YP_699371 |
Protein GI | 110801621 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA AATTAATGTT ATTATTTCTA ACAATAAGTA TTTTAATGAT GGTATTAGTT GGTTGCAGCA ATAATAGTAA TAACATTCAA AAAAATAGCA CTAATAAAGA AAAGATAACA GTAGCAACTT CAGGAACATA TTATCCATTT ACTTTTCTAG AGGGTGGAGA ACTTAAGGGG TTTGAAGTTG ATGTATGGAA TGAAATAGGA AAGAGATTAG GGTATGATGT TGAGTTTAAA ACAGCTTCTT TCAGCGGATT ATTTGGAATG CTTGAAAGTG GAAAGGTTAA TACAATAGCT AATCAAATAA CTGTAACTCC AGAAAGAGAA GAAAAGTATT ATTTCTCAGA GCCATATGTA TATAGTGGGG CTCAAATAAT AGTTAAAAAA GGCAATGATT CAATTAAATC CTTTGACGAT TTAAAGGGCA AAAAGGTTGG AGTTGATCTT GGAAGTAACT ATGAGAAAAT AGTTAAAGAT AAAGATGAAA ATAATGAGAT AAAAATATTA ACTTATCAAA ATACAGATGC TGCTTTCAAT GAACTTTTAC TTGGAAGAAT AGATGCTGTA GTAATAGATA GGGTTTCAGC TATAGCTGCC ATAAAAGAAA AAGATTTAAA TTTACAGCTA GCTGGAGAAC CAATAGATAA AATAGAAAAT GCCTATCCTT TTGTTAAGGA TGAAAAAGGC AAAGATTTAT CAGAAAATGT TAATAAAGCT TTAGATGAAA TGAAGAAAGA TGGAACTCTT AAATCTATTT CTGAAAAATG GCTAGGAATG AATGTAAGTG TTCCTAATAA CCAAGAAAAT GGTAATAATA TTATAGATAA TAATAAAAAT AATAGTATAG GTTTTGATTT TATATATTCA TTAGATTTAA TACCTATGTT ATTAAAGGCT ATTAACGTAA CAATATCTTT ATCAGTATTT GGCGTGATAT TAGGATTAAT AGTTGGTATA GCTCTTGCTA TGATAAGGGT TTACAAAATT CCTGTACTAA AGCAAATAGC TGAGGTTTAC ATATCATTCT TTAGAGGAAC ACCTCTTTTA GTACAATTAT TTTTACTTTA TTTTGGTGTG CCACAGGTAA TACCTTCACT TCAAAATATG AATGCATTTA CTGCGGCATT AATAGGTTTA GGACTTAATG CATCAGCTTA CATAGCAGAA ATATTAAGAT CATCAATAGA TGCCATAGAT AAAGGGCAAA TGGAAGCATG TCTATCATTA GGTATGACAA GGGCTCAAGC TTTAAAAAGA GTAGTTTTAC CACAAGCATT TAGAATAGCA ATACCTCCTT TAGGTAATAT ATTTGTAGAT ACAGTAAAAG GATCTTCATT AGCATTTACT TTAGGAGTTG TAGAATTATT AGCTAAGGCT CAAATGGAAG CGGCAGCTAG CTATAAATTC TTTGAAAGTT ATGTGGTAGT TGCAATTATG TACTGGATAA TCATAGGCTT CTTTAATTAC CTACAAAAGA TTTTAGAGAA AAAACTTTCA GTTTATTAA
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Protein sequence | MKKKLMLLFL TISILMMVLV GCSNNSNNIQ KNSTNKEKIT VATSGTYYPF TFLEGGELKG FEVDVWNEIG KRLGYDVEFK TASFSGLFGM LESGKVNTIA NQITVTPERE EKYYFSEPYV YSGAQIIVKK GNDSIKSFDD LKGKKVGVDL GSNYEKIVKD KDENNEIKIL TYQNTDAAFN ELLLGRIDAV VIDRVSAIAA IKEKDLNLQL AGEPIDKIEN AYPFVKDEKG KDLSENVNKA LDEMKKDGTL KSISEKWLGM NVSVPNNQEN GNNIIDNNKN NSIGFDFIYS LDLIPMLLKA INVTISLSVF GVILGLIVGI ALAMIRVYKI PVLKQIAEVY ISFFRGTPLL VQLFLLYFGV PQVIPSLQNM NAFTAALIGL GLNASAYIAE ILRSSIDAID KGQMEACLSL GMTRAQALKR VVLPQAFRIA IPPLGNIFVD TVKGSSLAFT LGVVELLAKA QMEAAASYKF FESYVVVAIM YWIIIGFFNY LQKILEKKLS VY
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