Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5107 |
Symbol | |
ID | 4647544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5470041 |
End bp | 5470901 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639808581 |
Product | extracellular solute-binding protein |
Protein accession | YP_955884 |
Protein GI | 120406055 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGCC CTTCCGTCGC GGGATGGAGG ACGGCTGCCG CCGTCCTCGT CGTGCTGGCC GGTCCCGCCT GTGCGGCGCC GGTCGGGGTG ACCGCCCCGA CGCTGGACTC GAGCAAGTGC AGCAGGGACG TGCTGGCCAC CCAGTACCCC GGCATCCTGA CGTTCGGCGC CGACCAACCC GTCTACCCGC CCTGGTACAT GGGCGACGAT CCGACCAACG GTGATGGGTT CGAATCGGCG CTCGCCTACG CCCTCGCCGC GAAACTGAAC TACACCGGCG ACGACGTGCG CTGGGTCCGG GTGCCGTTCA ACACCGCGCT CGCGCCCGGG GCCAAGACCT TCGACGTGAA CCTGTCCCAG TTCTCCATCA CCGAGCAGCG CAGGGCCGCC GTGGATTTCT CCACTCCGTA TTTCGACGTC ACGCAGGCCG TGGTGGCGGT GCGCACCTCG CCGGCCGCCG CCGTGACAAC ACTTGACGGA CTGCGTCCGC TACGGCTCGG CGCACAGGTC GGGACCACCA GTCACACCGC CGCGACCGAG CTGGGCGGAA GTGTCCCGGT GCAGGCGTAC AACACCAACG TGGACGCCAA GATGGCCCTG CTCGACGGTG AGATCGACGC GATGGTCGTC GACCTGCCGA CGGCGCTGAC CATGGCCGAA GAGCTTCGGC ACGGTGTCCT GGTTGGGCAG CTCCCGGCCG ACGGCGAACA CCTCGAGCAG TTCGGCATCG TCCTGTCGCA CGGCAGTCCG CTGACCCGCT GCGTGTCCTG GGCGGTCGAC TCGCTGCGCG AGGACGGCAC GTTGGCGGGT CTTCAGAACC GGTGGTTGAC GGACACCGGA CCGGTCGCCG TGTTGCGCTA G
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Protein sequence | MSCPSVAGWR TAAAVLVVLA GPACAAPVGV TAPTLDSSKC SRDVLATQYP GILTFGADQP VYPPWYMGDD PTNGDGFESA LAYALAAKLN YTGDDVRWVR VPFNTALAPG AKTFDVNLSQ FSITEQRRAA VDFSTPYFDV TQAVVAVRTS PAAAVTTLDG LRPLRLGAQV GTTSHTAATE LGGSVPVQAY NTNVDAKMAL LDGEIDAMVV DLPTALTMAE ELRHGVLVGQ LPADGEHLEQ FGIVLSHGSP LTRCVSWAVD SLREDGTLAG LQNRWLTDTG PVAVLR
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