| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2350 |
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| Symbol | |
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| ID | 4201129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2614817 |
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| End bp | 2616325 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083215 |
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| Product | His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease |
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| Protein accession | YP_696773 |
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| Protein GI | 110798792 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.140877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA AATTAATGTT ATTATTTCTA ACAATAAGTA TTTTAATGAT GGTATTAGTT
GGTTGTAGCA ATAATAGTAA TAACATTCAA AAAAATAGCA CTAATAAAGA AAAGATAACA
GTAGCAACTT CAGGAACATA TTATCCATTT ACTTTTCTAG AGGGTGGAGA ACTTAAGGGG
TTTGAAGTTG ATGTATGGAA TGAAATAGGA AAGAGATTAG GGTATGATGT TGAGTTTAAA
ACAGCTTCTT TCAGCGGATT ATTTGGAATG CTTGAAAGTG GAAAGGTTAA TACAATAGCT
AATCAAATAA CTGTAACTCC AGAAAGAGAA GAAAAGTATT ATTTCTCAGA GCCATATGTA
TATAGTGGGG CTCAAATAAT AGTTAAAAAA GGCAATGATT CAATTAAATC CTTTGACGAT
TTAAAGGGCA AAAAGGTTGG AGTTGACCTT GGAAGTAACT ATGAGAAAAT AGTTAAAGAT
AAAGATGAAA ATAATGAGAT AAAAATATTA ACTTATCAAA ATACAGATGC TGCTTTCAAT
GAACTTTTAC TTGGAAGAAT AGATGCTGTA GTAATAGATA GGGTTTCAGC TATAGCTGCC
ATAAAAGAAA AAGATTTAAA TTTACAACTA GCTGGAGAAC CAATAGATAA AATAGAAAAT
GCCTATCCTT TTGTTAAGGA TGAAAAAGGC AAAGATTTAT CAGAAAATGT TAATAAAGCT
TTAGATGAAA TGAAGAAAGA TGGAACTCTT AAATCTATTT CTGAAAAATG GCTAGGAATG
AATGTAAGTG TTCCTAATAA CCAAGAAAAT AGTAATAATA TTATAGATAA TAATAAAAAT
AATAGTATAG GTTTTGATTT TATGTATTCA TTAGATTTAA TACCTATGTT ATTAAAGGCT
ATTAACGTAA CAATATCTTT ATCAGTATTC GGTATGATAT TAGGATTAAT AGTTGGTATA
GCTCTTGCTA TGATAAGGGT TTACAAAATT CCTGTACTAA AGCAAATAGC TGAGGTTTAC
ATATCATTCT TTAGAGGAAC ACCTCTTTTA GTACAATTAT TTTTACTTTA TTTTGGTGTG
CCACAGGTAA TACCTTCACT TCAAAATATG AGTGCATTTA CTGCAGCATT AATAGGTTTA
GGACTTAATG CATCAGCTTA CATAGCAGAA ATATTAAGAT CATCAATAGA TGCCATAGAT
AAAGGGCAAA TGGAAGCATG TCTATCATTA GGTATGACAA GGGCTCAAGC TTTAAAAAGA
GTAGTTTTAC CACAAGCATT TAGAATAGCA ATACCTCCTT TAGGTAATAT ATTTGTAGAT
ACAGTAAAAG GATCTTCATT AGCATTTACT TTAGGAGTTG TAGAATTATT AGCTAAGGCT
CAAATGGAGG CGGCAGCTAG TTATAAATTC TTTGAAAGTT ATGTGGTAGT TGCAATCATG
TACTGGATAA TCATAGGCTT CTTTAATTAC CTACAAAAGA TTTTAGAGAA AAAACTTTCA
GTTTATTAA
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| Protein sequence | MKKKLMLLFL TISILMMVLV GCSNNSNNIQ KNSTNKEKIT VATSGTYYPF TFLEGGELKG
FEVDVWNEIG KRLGYDVEFK TASFSGLFGM LESGKVNTIA NQITVTPERE EKYYFSEPYV
YSGAQIIVKK GNDSIKSFDD LKGKKVGVDL GSNYEKIVKD KDENNEIKIL TYQNTDAAFN
ELLLGRIDAV VIDRVSAIAA IKEKDLNLQL AGEPIDKIEN AYPFVKDEKG KDLSENVNKA
LDEMKKDGTL KSISEKWLGM NVSVPNNQEN SNNIIDNNKN NSIGFDFMYS LDLIPMLLKA
INVTISLSVF GMILGLIVGI ALAMIRVYKI PVLKQIAEVY ISFFRGTPLL VQLFLLYFGV
PQVIPSLQNM SAFTAALIGL GLNASAYIAE ILRSSIDAID KGQMEACLSL GMTRAQALKR
VVLPQAFRIA IPPLGNIFVD TVKGSSLAFT LGVVELLAKA QMEAAASYKF FESYVVVAIM
YWIIIGFFNY LQKILEKKLS VY
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