Gene Rxyl_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0501 
Symbol 
ID4116760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp536044 
End bp536889 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID638035289 
Productextracellular solute-binding protein 
Protein accessionYP_643287 
Protein GI108803350 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGAGA GAAAGGTAGT AGCGCGAAGC TTCGCGACGC TGGCGCTGGC GCTCGCCGCC 
GCCCTGCTCC TCGCCGCGGC CTGCGGCGGC GGGGAGGGGG GAGGCGGCGG CGAGCAGACC
GCCGCGGGGG GCGGCGAGGG GACGGCCGGG ATGGAGGCCG GCCGGACCAT CACCGTCGCC
TCCGACATAG CCTACAGGCC CTTCGAGTTC TACAGAAACG GCGAGCCGGT CGGCTTCGAC
ATAGACCTGA TGCGCGAGAT CGGCAGGCGG GCGGGGTTCA CCCCCGAGTT CCAGAACGTC
ACCTTCGATG GCATCATCCC CGGCCTCGGC TCCAACCTCT ACGACGCGGC GATCTCCGCG
ATCACCATAA CCGAGGAGCG CCGCCAGCAG GTGGACTTCT CCGAGCCCTA CTTCAACGCC
GACCAGTCGC TGCTGGTGCG CAGCGACTCC GATATCCGCT CGGTGGACGA CCTCGGGCAG
GCCACGGTGG GCGTCCAGAT AGGCACCACC GGCGCCAACA AGGCCAACCA GTTCCAGCAG
CAGGGCAGGA TAGCCGAGGT GCGCACCTTC GACACCATAG AGGACGCCTT CACCGCGCTG
GAGAACGGCC AGGTGGACGC GGTAATAAAC GACCTGCCCG TCTCGCAGGA CAAGGCCAAC
ACCAGCGACG GCAGGCTCGA GGTGGTGCAG GTCATCCCCA CCGGGGAGCA GTACGGGATC
GCCTTCCCCA AGGGGAGCAA CCTGGTCGGC CCGGTGAACC GGGCGCTCCG GGAGATAAAG
CGCGACGGCA CCTACGCCGA GATCTACGAG AAGTGGATCG GGCGCAAGCC CGAGGAGATA
CCCTGA
 
Protein sequence
MPERKVVARS FATLALALAA ALLLAAACGG GEGGGGGEQT AAGGGEGTAG MEAGRTITVA 
SDIAYRPFEF YRNGEPVGFD IDLMREIGRR AGFTPEFQNV TFDGIIPGLG SNLYDAAISA
ITITEERRQQ VDFSEPYFNA DQSLLVRSDS DIRSVDDLGQ ATVGVQIGTT GANKANQFQQ
QGRIAEVRTF DTIEDAFTAL ENGQVDAVIN DLPVSQDKAN TSDGRLEVVQ VIPTGEQYGI
AFPKGSNLVG PVNRALREIK RDGTYAEIYE KWIGRKPEEI P