Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0242 |
Symbol | |
ID | 5193024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 283424 |
End bp | 284218 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640584687 |
Product | cystine transporter subunit |
Protein accession | YP_001265600 |
Protein GI | 148545498 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.310723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAT TCGCCAAACC GCTACTCAAC GCCAGCCTGG CCCTTCTGCT GGGTGCCGGC CTGCTCAGCC AGGCTTTCGC CGGCGAGCAA TTGAAGACCA TTCAGGAAAA AGGCGTCATC AACGTCGGCC TCGAGGGCAC CTACCCGCCA TTCAGCTTCC AGGACGAAAA CGGCAAACTG ACCGGCTTCG AAGTGGAGCT GTCTGAGCTG CTGGCCAAGG AGCTGGGGGT CAAGGCCAAG ATCCAGCCGA CCAAGTGGGA CGGCATCCTC GCCGCGCTGG AATCCAAACG CCTGGATGTA GTGGTCAATC AGGTGACCAT TTCCGAAGAG CGCAAGAAAA AGTACGACTT CTCCGAGCCC TACACTGTCT CCGGCATCCA GGCACTGATC CTGAAAAAGA AAGCCGAGCA GCTGAACATC AAGGGCGCAC AGGACCTGGC CGGCAAAAAG GTCGGCGTAG GCCTTGGCAC CAACTACGAA CAGTGGGTGA AAAAGGACGT GCCGCAAGCC GATGTGCGCA CCTATGAAGA CGACCCAAGC AAGTTCGCTG ACCTGCGCAA CGGCCGTATC GACGCCATCC TGATCGACCG CCTGGCGGCG CTGGAATACG CGCAAAAAGC CAAGGACACC CAACTTGCTG GCGATGCCTT CTCGCGCCTG GAAAGCGGCG TGGCCCTGCG CAAAGGTGAG CCGGAACTGT TGGCAGCCAT CAACAAGGCC ATCGACAAGC TAAAAGCTGA CGGCACGCTG GCCAAGCTGT CCGAGAAGTA CTTCGGTGCC GATGTCACCA AATGA
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Protein sequence | MSKFAKPLLN ASLALLLGAG LLSQAFAGEQ LKTIQEKGVI NVGLEGTYPP FSFQDENGKL TGFEVELSEL LAKELGVKAK IQPTKWDGIL AALESKRLDV VVNQVTISEE RKKKYDFSEP YTVSGIQALI LKKKAEQLNI KGAQDLAGKK VGVGLGTNYE QWVKKDVPQA DVRTYEDDPS KFADLRNGRI DAILIDRLAA LEYAQKAKDT QLAGDAFSRL ESGVALRKGE PELLAAINKA IDKLKADGTL AKLSEKYFGA DVTK
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