Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4772 |
Symbol | |
ID | 6181239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1909402 |
End bp | 1910202 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684531 |
Product | extracellular solute-binding protein |
Protein accession | YP_001811442 |
Protein GI | 172063791 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCT TCACCCCGAC GCTCAAGCAC GGCCTCGCCG CCGCCCTCCT CTGCGTGGCG GCCACGGCGT CGCACGCGGC GGATCTGCTC GACACCGTCA AGCAGGCCGG CGTGCTGAAG ATCGCACTCG AAGGCACCTA CCCGCCGTTC GACTACCGCA ATGCAGAAGG ACAACTCGAA GGATTCGACG TCGACGTCGC GAAGGCGGTC GCCGCGCGGC TCGGCGTGAA GCCGCAGTTC GTCACGACCG AATGGAGCGG GATTCTCGCC GGGCTGCAGG CCGGCAAGTT CGACGTGATC GTGAACCAGG TCGCAATCAC GCCGTCGCGC CAGCAGGCGC TCGACTTCAG CATGCCGTAC GTGTTTTCGT CCGCGCAGCT GCTGCAACGC CGGAACGACA CGCGTGCGTT CAAGTCGCTC GACGAGCTGA AGGGCAAGAA GGTCGGCGTG ACGATGGGCA GCAACTACGT CGATCTCGTG AAGACGGTGC CCGCAATCGA TCTGCAGGTC TATCCGGGCA CGCCGGAAAA CCTGCGCGAC CTCGCGGCGG GACGCATCGA CGCGGCGGTC AACGACCGCC TGATGCTGAG CTACCTGATC AAGAACTCGC ACCTGCCGCT GCGGCCCGGC TCCGTGCTCG CCGGCGGCGA GGACCGGATG GGCATCCCGT TCCGCAAGGG CAATCCGAAG TTCGCGAAGG CGATCGACGA CGCAGTCGCG TCGCTGCAGC AGGACGGCAC GCTGAAGAAG ATCTCGATGC AGTGGTTCGG CACGGACACG ACGCGGCCGG TCGCGCAATA A
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Protein sequence | MKPFTPTLKH GLAAALLCVA ATASHAADLL DTVKQAGVLK IALEGTYPPF DYRNAEGQLE GFDVDVAKAV AARLGVKPQF VTTEWSGILA GLQAGKFDVI VNQVAITPSR QQALDFSMPY VFSSAQLLQR RNDTRAFKSL DELKGKKVGV TMGSNYVDLV KTVPAIDLQV YPGTPENLRD LAAGRIDAAV NDRLMLSYLI KNSHLPLRPG SVLAGGEDRM GIPFRKGNPK FAKAIDDAVA SLQQDGTLKK ISMQWFGTDT TRPVAQ
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