Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3010 |
Symbol | |
ID | 4596457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3206705 |
End bp | 3207589 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639777615 |
Product | extracellular solute-binding protein |
Protein accession | YP_924199 |
Protein GI | 119717234 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCGCG CGACACTCGG CCGGGTCTAC TGTGCAGCCA TGCTGATTCG CCTGACACCC CGCGCGACCC TCGCCGCCGC CGTCCTGTCC GCCCTCGCCC TGACCGCCTC CGCCTGTGGA TCCGACAGCG GTTCCGACGG CAATGCCTCG GACAACACCG GCAGTAGCGA GGCCCCGAGC CTCAACCTGA TCTCCGACGG CACCCTCACG GTCTGTTCCG ACGTGCCGTA CCCGCCGTTC GAGAACTTCG ACAAGACCAC GCCCACGGGC TTCGCCGGCT TCGACGTCGA CATCGTCAAC GCCATCGCCG AGCAGCTCGA CCTCGAGGTC CAGATCAAGG ACTCCGACTT CAACGCGCTG CAGAGCGGCC TCGCCCTCAA CTCGGGCCAG TGCGACATGG CCGCGAGCGC GATGACGATC ACCCCCGAAC GCGAGCAGAA GATCGGCTTC AGCGACGGCT ACTACGACTC CGAGCAGTCG CTGCTGGTGC CCTCCGACTC CTCGATCGCC GGGATCGGCG ACCTCGACGG CGTCAAGGTC GGCGTCCAGA AGGGCACCAC CGGTGAGGCA TACGCCAACG AGAACGCCTC CGGCGCCGAC ATCGTGGTCT TCCCCAGCGA CGGCGAGATG TACGCCGCGA TCAAGGCCGG CCAGGTCGAC GCGCTGCTCC AGGACCTCCC GGTCAACCTG GACCACCAGA ACGACCCGAA GGCTCCCGGC GAGTTCAAGG TCGTCGAGAA GTACGACACC GGCGAGAGCT ACGGCCTGGC GATGAAGAAG GACAACACCG GGCTGATCGA CGCCGTCAAC GAGGCCCTGG CCACGATGAA GGACGACGGT GACTACCAGA AGATCTACGA CACCTACTTC GCGACCGACC AGTGA
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Protein sequence | MIRATLGRVY CAAMLIRLTP RATLAAAVLS ALALTASACG SDSGSDGNAS DNTGSSEAPS LNLISDGTLT VCSDVPYPPF ENFDKTTPTG FAGFDVDIVN AIAEQLDLEV QIKDSDFNAL QSGLALNSGQ CDMAASAMTI TPEREQKIGF SDGYYDSEQS LLVPSDSSIA GIGDLDGVKV GVQKGTTGEA YANENASGAD IVVFPSDGEM YAAIKAGQVD ALLQDLPVNL DHQNDPKAPG EFKVVEKYDT GESYGLAMKK DNTGLIDAVN EALATMKDDG DYQKIYDTYF ATDQ
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