30 homologs were found in PanDaTox collection
for query gene PXO_03405 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010717  PXO_03405  type III secretion apparatus protein, YscQ/HrcQ family  100 
 
 		 273 aa  531  1e-150  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010557  BamMC406_5643  type III secretion system apparatus protein YscQ/HrcQ  34.18 
 
 		 374 aa  121  9.999999999999999e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.82857  normal  0.117856 
 
 
-
 
NC_008392  Bamb_5860  type III secretion system apparatus protein YscQ/HrcQ  33.82 
 
 		 326 aa  120  1.9999999999999998e-26  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A1999  type III secretion system apparatus protein YscQ/HrcQ  32.96 
 
 		 359 aa  105  1e-21  Burkholderia pseudomallei 668  Bacteria  normal  0.501081  n/a   
 
 
-
 
NC_010515  Bcenmc03_5929  type III secretion system apparatus protein YscQ/HrcQ  36.76 
 
 		 364 aa  103  2e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0597281 
 
 
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NC_007435  BURPS1710b_A0429  SctQ  32.6 
 
 		 435 aa  103  3e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  0.193635  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1907  type III secretion system apparatus protein YscQ/HrcQ  32.58 
 
 		 359 aa  103  4e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0878707  n/a   
 
 
-
 
NC_007650  BTH_II0753  surface presentation of antigens domain-containing protein  51.25 
 
 		 423 aa  86.3  5e-16  Burkholderia thailandensis E264  Bacteria  normal  0.67104  n/a   
 
 
-
 
NC_006349  BMAA1629  type III secretion inner membrane protein SctQ  49.35 
 
 		 645 aa  82  0.00000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0677  type III secretion inner membrane protein SctQ  49.35 
 
 		 428 aa  81.6  0.00000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.129749  n/a   
 
 
-
 
NC_009079  BMA10247_A0636  type III secretion inner membrane protein SctQ  49.35 
 
 		 645 aa  82  0.00000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2196  type III secretion system apparatus protein YscQ/HrcQ  49.35 
 
 		 436 aa  81.6  0.00000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.583372  n/a   
 
 
-
 
NC_009075  BURPS668_A2279  type III secretion system apparatus protein YscQ/HrcQ  49.35 
 
 		 424 aa  81.6  0.00000000000001  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1956  type III secretion inner membrane protein SctQ  49.35 
 
 		 645 aa  82  0.00000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RSp0861  Hrp conserved protein HRCQ  34.97 
 
 		 354 aa  79.7  0.00000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.264626  normal  0.0266319 
 
 
-
 
NC_008752  Aave_0450  type III secretion system apparatus protein YscQ/HrcQ  31.35 
 
 		 352 aa  72.8  0.000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.180414  normal  0.188335 
 
 
-
 
NC_008543  Bcen2424_4839  type III secretion system apparatus protein YscQ/HrcQ  31.67 
 
 		 384 aa  58.9  0.00000008  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0073947  decreased coverage  0.0012825 
 
 
-
 
NC_008061  Bcen_3527  Type III secretion system apparatus protein YscQ/HrcQ  31.67 
 
 		 384 aa  58.9  0.00000008  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.20838  n/a   
 
 
-
 
NC_010515  Bcenmc03_5445  type III secretion system apparatus protein YscQ/HrcQ  31.67 
 
 		 384 aa  58.9  0.00000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.322534  normal  0.0784231 
 
 
-
 
NC_010086  Bmul_3755  type III secretion system apparatus protein YscQ/HrcQ  40 
 
 		 443 aa  57.8  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  decreased coverage  0.00143257 
 
 
-
 
NC_008391  Bamb_4214  type III secretion system apparatus protein YscQ/HrcQ  38.46 
 
 		 381 aa  55.1  0.000001  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.964929 
 
 
-
 
NC_010157  YpAngola_B0044  type III secretion system protein  32.41 
 
 		 307 aa  55.1  0.000001  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000000000156559  normal  1 
 
 
-
 
NC_010552  BamMC406_4736  type III secretion system apparatus protein YscQ/HrcQ  38.46 
 
 		 381 aa  54.7  0.000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.458134  normal  0.482732 
 
 
-
 
NC_008463  PA14_42610  type III secretion system protein  32.14 
 
 		 309 aa  54.7  0.000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.18956  normal  1 
 
 
-
 
NC_013456  VEA_003363  type III secretion inner membrane protein YscQ  27.91 
 
 		 322 aa  50.1  0.00004  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01727  type III secretion system protein  26.09 
 
 		 322 aa  49.7  0.00005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_0109  surface presentation of antigens (SPOA) protein  25.43 
 
 		 354 aa  47.8  0.0002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2080  type III secretion system apparatus protein YscQ/HrcQ  25.61 
 
 		 323 aa  45.4  0.001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.355086  n/a   
 
 
-
 
NC_009075  BURPS668_A2168  type III secretion system apparatus protein YscQ/HrcQ  25.61 
 
 		 323 aa  45.1  0.001  Burkholderia pseudomallei 668  Bacteria  normal  0.712652  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0578  type III secretion system apparatus protein YscQ/HrcQ  25.31 
 
 		 319 aa  45.1  0.001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.194369  n/a   
 
 
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