Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3527 |
Symbol | |
ID | 4095794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 651479 |
End bp | 652633 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638016826 |
Product | Type III secretion system apparatus protein YscQ/HrcQ |
Protein accession | YP_623394 |
Protein GI | 107025883 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.20838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGCGC TGTTCCTGAC GAATGCCGAC GCCGGCGACG CCGCGAACCG GGCCCTGCCC GCTGCTTCCC CGCCGCCCGC CGCCGCGCCG GCCGCGGTCG CGCTCGACGC GTCGCCCTAC CTGCCGCGCC TGTCCGCCGC CGCCGCGCGC GGGCTGTCGC ATGCGTACGG CGCAACCGGC GCCGTCCCGG TCACGCTCGG CGAGCATGCG TACGAGGTGC GCTGGCGCGT CGACGCCGAG CCGGCCACCG ATGCGCACGC ATACCGCTTC GTCGTCGGCC CGGCCGCCGG CACGCTGTGG ATCGACCCGC TCGCGGAAGC CGAATGGCTG GCCGATGCGG CCGACCCGGC GGTGCCCGCC GTGATCCGCG CGGCGCTGCT CGCCGATCTG TGCGCGCCGC TCACGGCCGT GCTGCAGGCC GCGACGCGGC AGCGCGTCGA ACTGCTGCCG CCGCCCGACG GCGTGCCGGC CTGGCATGCG TCGCCTGCCG CGCTGCGGTT CGAGTTGCGG CGCGCCGACG CCACGTGGCG CTGCCACGGC GCACTGCTGT TCGACGCGCC GGATGCGCTG GCCGTGTTCT TCGCGGCCGC GCCGGCCGCG CTCGCCGACG CGCGCGCGGC CTATGCGAAC CTGCCGGTGC CGCTCGTGTT CGAGATCGGC CGCACCGAGC TGACGACGGC CGAGCTGGCC GACGTGGTCG GCGGCGACAT CATCGCGATC GAGCGCTGGC AGGCGCACGA GCAGAACCTG CTGTGCGTCG CGCGGCTGCC GGCCGCGCCG GCATGGGAGA TCACCGGGCG GCCGTCGGGC AACCGGCTGA CCGTCGAACG AATCAGGGAG ATGCCATTGG AACCGACCCG CACCGACTCC GCGCCGCCGA CGACGCACGA CGCGCCGCCC GCCGACGTAC CGCGCTCGCT CGACGGCCTC GCGGTCGACC TGCGCTTCGA GCTGCCGCCC ACGTCGATGC CGTTGGGCGA GCTGAGCGCG CTGCAGCCGG GCGCCGTGAT CGAGCTGCAA CAGGGAATCA ACCAGAGCGT GATCCATCTC GTCGCGAACG GGATGCTGAT CGGCACCGGC CACCTGATCG CGGTCGGCCA GAAACTCGGC GTGCGCGTCG TCACGCTGAC GCAACCCGCG CCGCGCGAGC GCTGA
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Protein sequence | MPALFLTNAD AGDAANRALP AASPPPAAAP AAVALDASPY LPRLSAAAAR GLSHAYGATG AVPVTLGEHA YEVRWRVDAE PATDAHAYRF VVGPAAGTLW IDPLAEAEWL ADAADPAVPA VIRAALLADL CAPLTAVLQA ATRQRVELLP PPDGVPAWHA SPAALRFELR RADATWRCHG ALLFDAPDAL AVFFAAAPAA LADARAAYAN LPVPLVFEIG RTELTTAELA DVVGGDIIAI ERWQAHEQNL LCVARLPAAP AWEITGRPSG NRLTVERIRE MPLEPTRTDS APPTTHDAPP ADVPRSLDGL AVDLRFELPP TSMPLGELSA LQPGAVIELQ QGINQSVIHL VANGMLIGTG HLIAVGQKLG VRVVTLTQPA PRER
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