Gene BURPS668_A2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A2168 
Symbol 
ID4886202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand- 
Start bp2104736 
End bp2105707 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID640132105 
Producttype III secretion system apparatus protein YscQ/HrcQ 
Protein accessionYP_001063162 
Protein GI126443367 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02551] type III secretion system apparatus protein YscQ/HrcQ 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.712652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC GCTATACGTT GTTCAGGCGC GTCGCGCCCG CGGAATTGCC GCTGTACCGC 
CGTGCGCGGG CGCTGCGCGC GGCGGGCGAG CACGCCGCGC TGCGCACGAT CGCGCCGCCG 
CGCGGCTATG CGGCGCTGCG CGCGACGTGG CGGGGCGTCG AGCACGACGG CTGGGTCGAC 
CTCGACGATC TGATGCGCCG CCGCTACCCG GCGCTCGGCG CGCTCGCGTG GCGCGCGCTC 
GACAGGCGCT ACGCGCTCGA TTTGCTGAGC GGGCGGGACG CGGTGGCCGA GCTGCCCGCG 
CCGCCCGGCG GCTGGGCGCA TGTGCGGCTC GTCGATCTCG TCGAGCGCGC GCTGCCCGCC 
GAGCCGCTGC TGTGTTTCGA CACCCCGGGC CGCGCGCGTG CGCTGTTCCG CGCGTTCCCG 
GACGAAGCGC CCGCGGCGCG CGCCGTGGCC GACATCGGCG GCGTGCCGCT CACGATGCGC 
TTCGCGATCG GCACCGCGCG CCTGCCGCTC GCGCTGTTGC CCGCCGTCGC GCCGGGCGAC 
GTGCTGCTCG TATGCGCGCC GCGCAACGTG GTCCGCATCG GGGCGCGCGC ACTGTGTGAA 
TTTTGCTGCG AAGGAGAAAA CATCATGCTG AACGAACCCC TGGCCGACTC CGCGATCGAC 
GCCCTGCACG ACGCATCGCA CGACGCATCG CACGACGAAC CGACGGCGGC GCACGCGCCG 
CCGGCTTTCG ACATCGATGC GCTGCCCGTC ACGCTGGAGT TCGTGCTGCA CGACGAACGC 
GTGACGGTCG CGCAGCTCGC GGGCTGCCAC CCGGGCATGG TGCTGCCGCT GCGCGGTGCG 
CCGGGCGAGG TGACGATCCG CGCGAACGGC CAGCCGTTCG GCCGCGGCGA GCTGATCCAG 
GTCGGCGAGC AGCTCGCGGT CGAGGTGAAG GCGCTCTGGC GCGCGAAGCC GGCGGCGTGC 
GATGGCGAAT AA
 
Protein sequence
MSARYTLFRR VAPAELPLYR RARALRAAGE HAALRTIAPP RGYAALRATW RGVEHDGWVD 
LDDLMRRRYP ALGALAWRAL DRRYALDLLS GRDAVAELPA PPGGWAHVRL VDLVERALPA 
EPLLCFDTPG RARALFRAFP DEAPAARAVA DIGGVPLTMR FAIGTARLPL ALLPAVAPGD 
VLLVCAPRNV VRIGARALCE FCCEGENIML NEPLADSAID ALHDASHDAS HDEPTAAHAP 
PAFDIDALPV TLEFVLHDER VTVAQLAGCH PGMVLPLRGA PGEVTIRANG QPFGRGELIQ 
VGEQLAVEVK ALWRAKPAAC DGE