Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1999 |
Symbol | |
ID | 4885892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 1936560 |
End bp | 1937639 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640131937 |
Product | type III secretion system apparatus protein YscQ/HrcQ |
Protein accession | YP_001062994 |
Protein GI | 126442929 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.501081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCGACG CCCGCCTTGA GGCACTCGCC GCATCCGTGC CCGGCCTCGC GTCGTGGCAT GTTTCGGTGG TCGACAACGC GCATGTTTTC ATCGATCGCC TCGTCGACGC GGCGGTGATT GAACTGTCGA TCGGGCCGTC GGGAGGAATG GGCGGATTTC CCTTGTTCAT CGCGATCGAT CTCGACGCAC ACCCCGATCT CGGCATCGCT GCCTACCCCG AGCGTGACGC CGTGTGCGCA CACCGCGAGG CATCCGAGTC AGTCGCGCTC AGACAAGCCG TCTCCGGCAT CTTGCTCGAA CCGCTCGTCA AGTGTCTCGA TCGTTTCGGA CTCCCCTCGC CGCGCGTCGT CTCGATCACG CGGCCGCGCC CCGCCGATCG TGCCGGCGAC TGGCGCGACC AACCCGCAGT CGAACTGACG CTGGCGCTCG ATGAGCGCCG CGTCGCCTGC GCGATCAGCC TGCCGATGCG GGGCTACGAC ATCGTCGACG CGCTGCTGCG CACGCAACCC ACGCCTCGCA AGCCGGCCAT GTCGATACCG GGTGCGCTGA TCATCGGCGC GCGGCCGCTG GCGGTCGACA CGCTCAACGT CCTGGAAGCA GGCGATGTCC TGTTACGAGG CCTCTTTCCA CACTTCAACG CGACACTGCT CTCGACGGGC ACGCGCGCCA CCGAATCCCT GCGTGCCGTG GCGGCATGGG GCGCGCGAGG ACACGTGCGC CTTCACGCAG CAGTACAAGT CGACGTTCGA TCGTTCGTCA TCTCCAAGGA GCTTTCCATG TCGGAAGAAG TAGACCAGGC AAGTGCCGGC TTCGGCGTCG TCACAACCGA CGAACCCACC CGGATCGGCG AACTCGAACT CCCCGTGCAG TTCGAAATCG ACACCGTTTC GCTGCCCATC GATCAGTTGT CGGCGCTCGA ACCCGGCTAT GTCATCGAGC TCCCGGTCGC GGTGACGGAC GCGCGGTTGC GGCTCGTCGT CCATGGTCAG ACCGTCGGCT ATGGGGAGCT CGTGGCTGTC GGCGAGCATC TCGGCGTTCG CATCATTCGA ATGGCTCATC GACATGGTAC AGTTCAGTGA
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Protein sequence | MFDARLEALA ASVPGLASWH VSVVDNAHVF IDRLVDAAVI ELSIGPSGGM GGFPLFIAID LDAHPDLGIA AYPERDAVCA HREASESVAL RQAVSGILLE PLVKCLDRFG LPSPRVVSIT RPRPADRAGD WRDQPAVELT LALDERRVAC AISLPMRGYD IVDALLRTQP TPRKPAMSIP GALIIGARPL AVDTLNVLEA GDVLLRGLFP HFNATLLSTG TRATESLRAV AAWGARGHVR LHAAVQVDVR SFVISKELSM SEEVDQASAG FGVVTTDEPT RIGELELPVQ FEIDTVSLPI DQLSALEPGY VIELPVAVTD ARLRLVVHGQ TVGYGELVAV GEHLGVRIIR MAHRHGTVQ
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