27 homologs were found in PanDaTox collection
for query gene BURPS668_A1999 on replicon NC_009075
Organism: Burkholderia pseudomallei 668



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007435  BURPS1710b_A0429  SctQ  98.33 
 
 		 435 aa  696    Burkholderia pseudomallei 1710b  Bacteria  normal  0.193635  n/a   
 
 
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NC_009078  BURPS1106A_A1907  type III secretion system apparatus protein YscQ/HrcQ  98.33 
 
 		 359 aa  696    Burkholderia pseudomallei 1106a  Bacteria  normal  0.0878707  n/a   
 
 
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NC_009075  BURPS668_A1999  type III secretion system apparatus protein YscQ/HrcQ  100 
 
 		 359 aa  709    Burkholderia pseudomallei 668  Bacteria  normal  0.501081  n/a   
 
 
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NC_008392  Bamb_5860  type III secretion system apparatus protein YscQ/HrcQ  39.42 
 
 		 326 aa  160  4e-38  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
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NC_010557  BamMC406_5643  type III secretion system apparatus protein YscQ/HrcQ  34.88 
 
 		 374 aa  159  5e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  0.82857  normal  0.117856 
 
 
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NC_010515  Bcenmc03_5929  type III secretion system apparatus protein YscQ/HrcQ  35.38 
 
 		 364 aa  139  8.999999999999999e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0597281 
 
 
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NC_010717  PXO_03405  type III secretion apparatus protein, YscQ/HrcQ family  32.96 
 
 		 273 aa  105  2e-21  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II0753  surface presentation of antigens domain-containing protein  61.73 
 
 		 423 aa  101  2e-20  Burkholderia thailandensis E264  Bacteria  normal  0.67104  n/a   
 
 
-
 
NC_009075  BURPS668_A2279  type III secretion system apparatus protein YscQ/HrcQ  28.16 
 
 		 424 aa  101  2e-20  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
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NC_006349  BMAA1629  type III secretion inner membrane protein SctQ  60.49 
 
 		 645 aa  97.8  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
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NC_009079  BMA10247_A0636  type III secretion inner membrane protein SctQ  60.49 
 
 		 645 aa  97.8  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
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NC_008835  BMA10229_1956  type III secretion inner membrane protein SctQ  60.49 
 
 		 645 aa  97.8  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2196  type III secretion system apparatus protein YscQ/HrcQ  60.49 
 
 		 436 aa  97.4  3e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  0.583372  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0677  type III secretion inner membrane protein SctQ  60.49 
 
 		 428 aa  97.4  3e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  0.129749  n/a   
 
 
-
 
NC_003296  RSp0861  Hrp conserved protein HRCQ  32.11 
 
 		 354 aa  83.2  0.000000000000006  Ralstonia solanacearum GMI1000  Bacteria  normal  0.264626  normal  0.0266319 
 
 
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NC_008752  Aave_0450  type III secretion system apparatus protein YscQ/HrcQ  36.26 
 
 		 352 aa  81.6  0.00000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.180414  normal  0.188335 
 
 
-
 
NC_010086  Bmul_3755  type III secretion system apparatus protein YscQ/HrcQ  40 
 
 		 443 aa  64.7  0.000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  decreased coverage  0.00143257 
 
 
-
 
NC_008543  Bcen2424_4839  type III secretion system apparatus protein YscQ/HrcQ  38.96 
 
 		 384 aa  63.5  0.000000006  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0073947  decreased coverage  0.0012825 
 
 
-
 
NC_010515  Bcenmc03_5445  type III secretion system apparatus protein YscQ/HrcQ  38.96 
 
 		 384 aa  63.5  0.000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.322534  normal  0.0784231 
 
 
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NC_008061  Bcen_3527  Type III secretion system apparatus protein YscQ/HrcQ  38.96 
 
 		 384 aa  63.5  0.000000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.20838  n/a   
 
 
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NC_008391  Bamb_4214  type III secretion system apparatus protein YscQ/HrcQ  36.36 
 
 		 381 aa  62.4  0.00000001  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.964929 
 
 
-
 
NC_010552  BamMC406_4736  type III secretion system apparatus protein YscQ/HrcQ  36.36 
 
 		 381 aa  62  0.00000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.458134  normal  0.482732 
 
 
-
 
NC_008463  PA14_42610  type III secretion system protein  26.73 
 
 		 309 aa  60.5  0.00000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.18956  normal  1 
 
 
-
 
NC_013456  VEA_003363  type III secretion inner membrane protein YscQ  27.84 
 
 		 322 aa  57.4  0.0000003  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_010157  YpAngola_B0044  type III secretion system protein  27.6 
 
 		 307 aa  53.1  0.000007  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000000000156559  normal  1 
 
 
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NC_009783  VIBHAR_01727  type III secretion system protein  22.22 
 
 		 322 aa  49.7  0.00009  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_0109  surface presentation of antigens (SPOA) protein  32.71 
 
 		 354 aa  42.7  0.01  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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