| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5929 |
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| Symbol | |
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| ID | 6128733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3123784 |
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| End bp | 3124878 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641653013 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_001779540 |
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| Protein GI | 170738280 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0597281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CCGGCCAACC TGCTCGCCAC CCCGTCCGCG CGTTGCGCGA CGACCCGAAC
GGGCTGCCAC GCATCGATGC GGAACTCGCG AGCGTTGCCC GTTTGCTAGG CGATGCGCGT
CTCGATGCGT GCGTTGCCGG GCTCGACGGC GCGGCGGACT GGCGGCTGGT GCCCGGCGAC
GTGGCGGACG GCAGCCTGTG CTGGGTCGCG CTGCAGTACG ACGGCGCGCT GGCCTGGATC
GGGCTGAACG CCGACGCGCA CCCGGCACTG GCGGCGCTCG CGGACGACGA TGGCTCGCCG
CTGTCGTGCG CGATCGCGGG CCTGCTGCTC ACGCCGCTGA TCGATCTGCT CGACACGCTC
GGCGCCGTGA ACGTCAGCGT CGCGGCGATC GGGCGTCATG CCCCGGTGCA TCGCGACGGC
CGCCGCGCGG CGACCGTCGG CATGCTCTGC GTACATGGCG CGCACCGCCA TGCCTGCCGG
ATCGGGCCGG CCGATCCCGG CTGGATCGAC CTGCTCGAAC GCCGGATGGC CCGGCATCCG
GCGCCGCTGC CGGCGCGGCT CGGCCGGATT CGCGTGCCCG GCTACCTGAT CGTCGGCGAG
AAGGCGTTGC CGATCGCGAC GCTCAGGCGC CTGCGTCCCG GCGACGTCGT ATTGCGCTTC
GCCGATCCGG CATTCGCCGG TTGGGACGGC GCCGCGCCGA CCCACGCGCT TGCCCTGCGC
TGGGGCGTGG CCGGCATGCA TCAGTACGTC GCGCACGCCA CGCTCGACGG CCCACGACTC
GTTCTCGATA CGGAACCTGC CATGACCGAC CGCAACGACC ACCCGGTGCC CGGTGCCCCC
GACGCCGAGA CCCAGACCTC GCTCGACGAA CTCGAGCTGC CCGTCAGTTT CGAAATCGAA
ACGGTCACGC TGCCGCTCGC GCAGTTGTCC GCGCTGCGGC CGGGCTACGT GATCGAGTTG
CGGGGCACGC TGCGCGACGC GCGCATCCGG CTCCTCGCGT ACGGGCAACT GATCGGCATC
GGCGAACTCG TCACGGTCGG CGAGCAGCTC GGCGTGCGGG TCATCGACGT ATTCGGCAGC
CATGACGCAG ATTAA
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| Protein sequence | MNATGQPARH PVRALRDDPN GLPRIDAELA SVARLLGDAR LDACVAGLDG AADWRLVPGD
VADGSLCWVA LQYDGALAWI GLNADAHPAL AALADDDGSP LSCAIAGLLL TPLIDLLDTL
GAVNVSVAAI GRHAPVHRDG RRAATVGMLC VHGAHRHACR IGPADPGWID LLERRMARHP
APLPARLGRI RVPGYLIVGE KALPIATLRR LRPGDVVLRF ADPAFAGWDG AAPTHALALR
WGVAGMHQYV AHATLDGPRL VLDTEPAMTD RNDHPVPGAP DAETQTSLDE LELPVSFEIE
TVTLPLAQLS ALRPGYVIEL RGTLRDARIR LLAYGQLIGI GELVTVGEQL GVRVIDVFGS
HDAD
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