| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0429 |
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| Symbol | sctQ |
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| ID | 3692483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 597729 |
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| End bp | 599036 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637730683 |
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| Product | SctQ |
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| Protein accession | YP_335588 |
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| Protein GI | 76819487 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.193635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAATCC GCTCTCAACG CATGGCCTCA CCCTTCTCCG TCGATCCGAA TGCCGACCCG
CCCTGCGGCG TCGCCACTCG CCAGCCGGGC AATCGATCAA ACGCATTCGA CGGCCCGGCG
AATCGATCGG CGCCGCCCCA ATCCACTGCA CGACAAAATG CGGCAACCGG CATTGCGCCG
CTGTCGCCGG TTCGGGTCGA ACCCGCTGTC GCACGTGCAT CGAGAACCGT GTTCGACGCC
CGCCTTGAGG CACTCGCCGC ATCCGTGTCC GGCCTCGCGT CGTGGCATGT TTCGGTGGTC
GACAACGCGC ATGTTTTCAT CGATCGCCTC GTCGACGCGG CGGTGATTGA ACTGTCGATC
GGGCCGTCGG GAGGAATGGG CGGATTTCCC TTGTTCATCG CGATCGATCT CGACGCACAC
CCCGATCTCG GCATCGCTGC CTACCCCGAG CGTGACGCCG TGTGCGCACA CCGCGAGGCA
TCCGAGTCAG TCGCGCTCAG ACAAGCCGTC TCCGGCATCT TGCTCGAACC GCTCGTCAAG
TGTCTCGATC GTTTCGGACT CTGCTCGCCG AGCGTCGTCT CGATCACGCG GCCGCGCCCC
GTCGATCGCG CCGGCGACTG GCGCGACCAA CCCGCAGTCG AACTGACGCT GGCGCTCGAT
GAGCGCCGCG TCGCCTGCGC GATCAGCCTG CCGATGCGGG GCTACGACAT CGTCGACGCG
CTGCTGCGCA CGCAACCCAC GCCTCGCAAG CCGGCCATGT CGATACCGGG TGCGCTGATC
ATCGGCGCGC GGCCGCTGGC GGTCGACACG CTCAACGTCC TGGAAGCCGG CGATGTCCTG
TTACGAGGCC TCTTTCCACA CTTCAACGCG ACACTGCTCT CGACGGGCAC GCGCGCCACC
GAATCCCTGC GTGCCGTGGC GGCATGGGGC GCGCGAGGAC ACGTGCGCCT TCACGCAGCA
GTACAAGTCG ACGTTCGATC GTTCGTCATC TCCAAGGAGC TTTCCATGTC GGAAGAAGTA
GACCAGGCAA GTGCCGGCCT CGGCGTCGTC ACAACCGACG AACCCACCCG GATCGGCGAA
CTCGAACTCC CCGTGCAGTT CGAAATCGAC ACCGTTTCGC TGCCCATCGA TCAGTTGTCG
GCGCTCGAAC CCGGCTATGT CATCGAGCTC CCGGTCGCGG TGACGGACGC GCGGTTGCGG
CTCGTCGTCC ATGGTCAGAC CGTCGGCTAT GGGGAGCTCG TGGCTGTCGG CGAGCATCTC
GGCGTTCGCA TCATTCGAAT GGCTCATCGA CATGGTACAG TTCAGTGA
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| Protein sequence | MVIRSQRMAS PFSVDPNADP PCGVATRQPG NRSNAFDGPA NRSAPPQSTA RQNAATGIAP
LSPVRVEPAV ARASRTVFDA RLEALAASVS GLASWHVSVV DNAHVFIDRL VDAAVIELSI
GPSGGMGGFP LFIAIDLDAH PDLGIAAYPE RDAVCAHREA SESVALRQAV SGILLEPLVK
CLDRFGLCSP SVVSITRPRP VDRAGDWRDQ PAVELTLALD ERRVACAISL PMRGYDIVDA
LLRTQPTPRK PAMSIPGALI IGARPLAVDT LNVLEAGDVL LRGLFPHFNA TLLSTGTRAT
ESLRAVAAWG ARGHVRLHAA VQVDVRSFVI SKELSMSEEV DQASAGLGVV TTDEPTRIGE
LELPVQFEID TVSLPIDQLS ALEPGYVIEL PVAVTDARLR LVVHGQTVGY GELVAVGEHL
GVRIIRMAHR HGTVQ
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