| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42610 |
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| Symbol | pscQ |
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| ID | 4381423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3790665 |
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| End bp | 3791594 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639325986 |
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| Product | type III secretion system protein |
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| Protein accession | YP_791551 |
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| Protein GI | 116049644 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.18956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGTG CGGACCTCGA CCTGCCGCTC GCCAGCCGCG CCGAACTGGA TCTCCAGCGA
CGTCTCGCAC GTTGCCGTCG CCACTATGTC GGCAACGCTT TGCAAGCGCG CCTGGACATC
GCCCAGGCCG CCCCCGACGT CGATCTCGAA CTGAGCCTGG CGTGGGACGG CCTGCCCCTG
CGCTTTCTCT GCCAGGCCCC GGCGCTGGCC CGCTGGCTCG CGCCGAACCT GCAGGAGGCA
GCCTTCGCCA GCCTGCCGGC GGCCCTGCAA CTGGCCTTGC TGGAGCGCGA AGGCAACGTC
TTTCCCGGCC TGGTCTGGTA CGGCCTGAGC CCGGCGCAAC CACGCGCTGC GATGGGCCTG
CGCCTGAGCC TGGAACGCGA CGACCAGCGC CTGGCGCTCT GGCTCGACGG CGATCCCGCG
ACGCTGCTGG CACGCCTGCC GCCGCGCCCC TCGGCGCAAC GCCTGGCCAT ACCGCTGCGC
CTGTCGCTGC AATGGCCCGG CCTGCCGCTG GAGGCCGGCG AGCTGCGCAC CCTGGAGCCC
GGCGACCTGT TGCTGCTGCC TGCCGGCCAT CGCCCCGACG CAGCGCTGCT GGGGGTTCTC
GAAGGACGCC CCTGGGCGCG CTGCCAACTC CACTCCACGC AACTGGAACT GCTCGACATG
CACGACACCC CCTCCCTCGC CGACAGCGAG GACCTGCACG AACTCGACCA ACTGCCGATC
CCGGTCAGCT TCGAGGTCGG CCGCCGCACC CTGGACCTGC ATACCCTCTC GACCCTGCAG
CCAGGCTCGC TGCTCGATCT CGACTGTGCC CTGGACGGCG AAGTGCGCAT CCTCGCCAAC
CAGCGCTGCC TCGGTATCGG CGAACTGGTG AGGCTCCAGG ACCGGCTCGG GGTGCGCGTA
ACCCGTCTGT TCGGACACGA CGAAGCATGA
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| Protein sequence | MNGADLDLPL ASRAELDLQR RLARCRRHYV GNALQARLDI AQAAPDVDLE LSLAWDGLPL
RFLCQAPALA RWLAPNLQEA AFASLPAALQ LALLEREGNV FPGLVWYGLS PAQPRAAMGL
RLSLERDDQR LALWLDGDPA TLLARLPPRP SAQRLAIPLR LSLQWPGLPL EAGELRTLEP
GDLLLLPAGH RPDAALLGVL EGRPWARCQL HSTQLELLDM HDTPSLADSE DLHELDQLPI
PVSFEVGRRT LDLHTLSTLQ PGSLLDLDCA LDGEVRILAN QRCLGIGELV RLQDRLGVRV
TRLFGHDEA
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