| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0450 |
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| Symbol | |
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| ID | 4669752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 486205 |
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| End bp | 487263 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639821657 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_968831 |
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| Protein GI | 120609153 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.180414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.188335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCCCG GCGAGGCGCA TCTGGCGCGC ATCGCCTTCG ACCGCCGCTT CGCCCGCTGG
GCGGCCCGGC TCTGCAGCCA GCCGCCCGGC CGCGTGGCAG CCGCCGCGCC GGGCTGCCAC
CACGACGCGG TGTCGCTGGA TTTCTCCTGC GTGCATGGCC ACCTGCAGGT CTCCGTGCCC
CTGTCGGCCT GGCCGACGCT CGGCATGGCG GCCCGCCTGG CGGATGCCGC GCTGGCCCGC
GAAGTGGCGG AAACCCTGAT CGCCGCCCCC CTTGCCGCCG TGGCGCCGGT GCTGCCGGGG
CTCGCACTGA CCGGCGTGTC CGTGCGCACC GCCCTGCAGG CGCCGCTGGA ATGGACCCAG
GGCGCCATGC GCATCGGCCT GCACGCCATC GACGGCGGCG TGGCGGATCG GCTGTGCGCC
CACCTGGCGC ATTCCGCGCA GGCCGACGGC GAGCCCCTGG CCGCGCTGCG GCTGCCGGGC
ACCGTCCGCC TCGCCACCCG CCGCCTCGCG CCCGCCGACC TCGCCAGCCT GGCTGCGGGC
GACGTCGTCT TGTGCGGCAC GCTCTCCGCG GGCCGGCGGC GCCTTTGCCA TCTTTCCTTC
GGACTGGGAA CCACCATGCA CATACCCGCA GAACTCGATC TCGACGATTC CGAAATCGCC
CTCCACGCCG CGCCGCAGGC CGATGCCTTC GCGGAGCCGG CGGACGAAGA CGGCGCGCCG
GACCCGGCCG GCGCCGCCGA GGAAGCCGCG CCGTGTTCCG GCAGCGATGC CGAACCCGAG
GCCACGCCGC TGCCGCTGAC CGACATCGGC GGCATCCGCG TTCCCGTCGC CATCGAGATC
GACACCGCGC GCATCCGGCT GGACGAACTC GCCGCGCTCG ATGCCGGCGC CATCGTCCCG
CTCGCCGTCG CCGCCCGCGA CGCCACAGTC CGCCTGGTCT GCCACGGCCA GGTCGTGGGC
ACCGGCCGCC TGGTCGTCAT CGGCGATCAC CTGGGCGTGC GCATCGCGCA CATGGCGGCG
GCCGGCGCAG CGTCGCCCAC GGCCACAGGC GCGCCATGA
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| Protein sequence | MPPGEAHLAR IAFDRRFARW AARLCSQPPG RVAAAAPGCH HDAVSLDFSC VHGHLQVSVP
LSAWPTLGMA ARLADAALAR EVAETLIAAP LAAVAPVLPG LALTGVSVRT ALQAPLEWTQ
GAMRIGLHAI DGGVADRLCA HLAHSAQADG EPLAALRLPG TVRLATRRLA PADLASLAAG
DVVLCGTLSA GRRRLCHLSF GLGTTMHIPA ELDLDDSEIA LHAAPQADAF AEPADEDGAP
DPAGAAEEAA PCSGSDAEPE ATPLPLTDIG GIRVPVAIEI DTARIRLDEL AALDAGAIVP
LAVAARDATV RLVCHGQVVG TGRLVVIGDH LGVRIAHMAA AGAASPTATG AP
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