| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4214 |
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| Symbol | |
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| ID | 4313109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1136505 |
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| End bp | 1137650 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638152055 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_776101 |
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| Protein GI | 115358963 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.964929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCGC TGTCCCTGAC GAATGCCGAC GCCGGCGACG CCGCGAACCG GGCTCCGCCC
GCCGCCGCCA CCCCGGCCGC CGCCGCGGTC GCGCTCGACG CGTCGCCCTA TCTGCCGCGC
CTGTCCGCCG CCGCCGCGCG CGGGCTGTCG CACGCATACG GCGCGACGGC CGCGGCTCCG
GTCACGCTCG GCGAACACGC GTACGAGGTG CGCTGGCGCG TCGATGCCGA ACCGGTCGCC
GACGCCCATG CGTACCGCTT CGTCATCGGC CCGGCCGCCG GCACGCTGTG GATCGATCCG
CTCGCCGAAA ACGAGTGGCT CGGCGACGCG GCCGACCCGG CCGTGCCGGC CGTGATCCGC
GCGGCGCTGC TCGCCGATCT CGCCGCGCCG CTCGCCGCCG CGCTGCAGGC CGCGACGCGG
CAGCGCGTGG AATTGCTGCC GCCGCCCGCG AGCGTGCCCG CGTGGCGCAC CGCGCCGGCC
GCGCTGCGCT TCGAGCTGCG TCGCGCCGAC GGCGCGTGGC GCTGCCATGG CGCGCTGCTG
TTCGATGCGC CGGACGCGCT CGCGGTGTTC TTCGCGACGC CGGTGGCCAC GCGAGCCGAT
ACGCGCGCCG CGTATGCGGG CCTGCCGGTG CCGCTGGTAT TCGAGATCGG CCGGACCGAG
CTGACGATGG CCGAGCTGGC CGACGTCGTC GGCGGCGACA TCATCGCGAT CGAGCACTGG
CGCGCGCACG AGCAGAACCT GCTGTGCGTT GCACGGGTGC CGGCCGCGCC GGCGTGGGAA
ATCACCGGAC GGCCGTCGGG CAACCGGCTG ACCGTCGAAC GAATCAGGGA GATGCCTTTG
GAACCGACCC GCACCGATAC CCCGTCCGCG ACCACGCACG ACGCGTCGGC CGACGATGCG
CCGCGCTCGC TCGACAGCCT CGCGGTCGAC CTGCGTTTCG AGTTGCCGCC CACGTCGATC
CCGCTCGGCG AGCTCGGCAC GCTGCAGCCC GGCGCGGTGA TCGAACTGCA GCAAGGGATC
AACCAGAGCG TGATCCATCT CGTCGCGAAC GGGATGCTGA TCGGCACCGG CCAGCTGATC
GCGGTCGGCC AGAAGCTCGG CGTGCGCGTC GTCACGCTGA CGCAGCCCGC GCCGCGCGAG
CGCTGA
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| Protein sequence | MPALSLTNAD AGDAANRAPP AAATPAAAAV ALDASPYLPR LSAAAARGLS HAYGATAAAP
VTLGEHAYEV RWRVDAEPVA DAHAYRFVIG PAAGTLWIDP LAENEWLGDA ADPAVPAVIR
AALLADLAAP LAAALQAATR QRVELLPPPA SVPAWRTAPA ALRFELRRAD GAWRCHGALL
FDAPDALAVF FATPVATRAD TRAAYAGLPV PLVFEIGRTE LTMAELADVV GGDIIAIEHW
RAHEQNLLCV ARVPAAPAWE ITGRPSGNRL TVERIREMPL EPTRTDTPSA TTHDASADDA
PRSLDSLAVD LRFELPPTSI PLGELGTLQP GAVIELQQGI NQSVIHLVAN GMLIGTGQLI
AVGQKLGVRV VTLTQPAPRE R
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