Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0636 |
Symbol | sctQ |
ID | 4889684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 590261 |
End bp | 592198 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640146912 |
Product | type III secretion inner membrane protein SctQ |
Protein accession | YP_001077837 |
Protein GI | 126447332 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CCGATCTGAG GCCCGTGCGG ATCATCGCGG GCGCGCCCGC GGCCGAGCCG GCCGGTGCGC CGGCGCCGCG AGCCGCGCGG CGCGGCTTCG ACTACGCGCA GTTGATGCGG CGCTCGCGCG TCGCGCCGGC CGGCGCGCCC GCGCCGCGCG GCGACGGCGA ACGCCCGCGC GACGCGGCGA TGCCGTGGCG CGACGGCGCC GCGCCGTCGT TCGAGCGCGA TCCGGCCGCG CTGCCCGATG CGCTCGGCCG CGAGGCGATG GCGCGCGCGT GCGCGGGCGC CGATGCGTTC GTCAATCAGG TGTTCGCGCA GCGCGAGCGG GTGGTGCGCG TCGCCGAAGC GTTGGCCGCC GAGATCGCCG CGCTCGGCGG CGGCGACGCG TCGGGCCAGT GGGAGCAGCC TGCCGCTCGA CGCGGCGTTG CTGCCGGATA CGGTGCTGCA TCTCGTTCTT TCGCGTTTCG ACTTGCGGCT TCGGTTCGAG ACGCCGGACG CGGCGACGCG GCACTTACTC TGCACACATG GCGCGACGCT GCACGCGCGA CTCGACACGC TGCTCGCGCA TCACGGCGCG CCGCGCACGA TCGAGATCGA CGTCGGCTGA AACGCGCGCA ATCGAACCCG ACCGCGACGA TGAACACCGA GCCGATCGAA CTGGAACCCG CTACCGCCGA GCCGCCCGGC ATCGACACCG CGCTGCCGCT GCCCGCGTGC AGCGCGTTCG ACGCGGCGCT CGCGCGCATC GTCTGCGACG CGCGGCTCGC CGCCTGGCTC GCGCGCTTTC CGGGGCTGTC CGACTGGCGC GCGTCGGCGG GCGAGCGGCC GTGCTTCGAG CGCCCCGGCG TGCTCGAGCT GCGGCGCGGC GGCGCGGCCG CGCACGTCGC GATCGATCTC GCGGCGTTTC CGGCGCTCGA GGTCGTCGCC GCGCCCGCGC TCGACGCGCG CGGCGACGCG AGCCTCTCGC TGCGCGCGGC GCTCGCGGCG ACGCTGCTCG CGCCGCTCGT CGCCGCGTTC GCGGCGGCGG GGCTCGACGG CGTGACGGTC GGCGCGCTGC GCGCGGTGCC CGCCGCGGCG CTCGACGCGA CGCGCTGCAT GCTGTCGTTC GCGCTCGACG GCGCGCCGCT GCGCTGCGCG CTGCTCGATG CGCAAGCGCC GTGGCTCGAC GCGCTCGCGG CCCGGCTGCG CGACGAGCGG CGCCGCGATG CGTCAAGCGG GCTCGCCCGC GTGCGCTTGC CGGGGCGCGT GCGGCTCGGC ACGCGCGCGC TGCCGCTCGC GGTGCTGCGC AGCCTGCGGC CGGGCGACGT GCTGCTCGAC ATGGTGCCCG CCGCACTGGG CGCCGCGCGG GCGGGCCCGC TGCATGCGTG GTGGGGCGCG CGGCGCGCGG CCCAATGGCA CGCAACCGTT CTGATCGAGG GAACCACGAT GACGATGACC GAAATGCCAG ACACCGCCGA CGACCTCGAC GAGCCGATCG TCGCGGGCGA CTTGCCGGCC GATTCCTTGG CCGATTTTCC GGCCGATTCC CCGGCTGCAG TTCCGGCTGA ATTTCCGGCT GAATTTCCGG CCGACCGGGC GGGCGATCTG CCGGCCCCTT CCGCGGCTCA TTCGTCGCCC GGTTCGCTCG CCGGGTTGCC GGCCGGGTTG CAGGCCGACG CGCCGCCGCG CGACGCGCGG TACGCCGCGC CCGAGCCGGC CGATCTCGGC GAGGTCGCGC TGCCCGTGCA CGTCGAGATC GACACGCTGT CGCTGTCGAT CGCCGAGCTC GCCGCGCTGC GCCCGGGCTA CGTGCTCGAG TTGCCGCTCG CCGCGCGCGA CGTGCCGGTG CGGCTCGTCG CATACGGCCA GGCGATCGGC GGCGGCCGCC TCGTCGCGGT GGGCGCGCAT CTCGGCGTGC GGATCGACCG GATGGCGGGC GACGATGGTT CAGTTTAA
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Protein sequence | MSAADLRPVR IIAGAPAAEP AGAPAPRAAR RGFDYAQLMR RSRVAPAGAP APRGDGERPR DAAMPWRDGA APSFERDPAA LPDALGREAM ARACAGADAF VNQVFAQRER VVRVAEALAA EIAALGGGDA SGQWEQPAAR RGVAAGYGAA SRSFAFRLAA SVRDAGRGDA ALTLHTWRDA ARATRHAARA SRRAAHDRDR RRLKRAQSNP TATMNTEPIE LEPATAEPPG IDTALPLPAC SAFDAALARI VCDARLAAWL ARFPGLSDWR ASAGERPCFE RPGVLELRRG GAAAHVAIDL AAFPALEVVA APALDARGDA SLSLRAALAA TLLAPLVAAF AAAGLDGVTV GALRAVPAAA LDATRCMLSF ALDGAPLRCA LLDAQAPWLD ALAARLRDER RRDASSGLAR VRLPGRVRLG TRALPLAVLR SLRPGDVLLD MVPAALGAAR AGPLHAWWGA RRAAQWHATV LIEGTTMTMT EMPDTADDLD EPIVAGDLPA DSLADFPADS PAAVPAEFPA EFPADRAGDL PAPSAAHSSP GSLAGLPAGL QADAPPRDAR YAAPEPADLG EVALPVHVEI DTLSLSIAEL AALRPGYVLE LPLAARDVPV RLVAYGQAIG GGRLVAVGAH LGVRIDRMAG DDGSV
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