28 homologs were found in PanDaTox collection
for query gene RSp0861 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003296  RSp0861  Hrp conserved protein HRCQ  100 
 
 		 354 aa  696    Ralstonia solanacearum GMI1000  Bacteria  normal  0.264626  normal  0.0266319 
 
 
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NC_010515  Bcenmc03_5929  type III secretion system apparatus protein YscQ/HrcQ  33.33 
 
 		 364 aa  95.1  2e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0597281 
 
 
-
 
NC_008392  Bamb_5860  type III secretion system apparatus protein YscQ/HrcQ  26.77 
 
 		 326 aa  95.1  2e-18  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010557  BamMC406_5643  type III secretion system apparatus protein YscQ/HrcQ  27.42 
 
 		 374 aa  90.9  3e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  0.82857  normal  0.117856 
 
 
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NC_007650  BTH_II0753  surface presentation of antigens domain-containing protein  33.48 
 
 		 423 aa  89.7  7e-17  Burkholderia thailandensis E264  Bacteria  normal  0.67104  n/a   
 
 
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NC_007435  BURPS1710b_A0677  type III secretion inner membrane protein SctQ  34.09 
 
 		 428 aa  87.8  3e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  0.129749  n/a   
 
 
-
 
NC_009075  BURPS668_A2279  type III secretion system apparatus protein YscQ/HrcQ  33.33 
 
 		 424 aa  86.7  5e-16  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1629  type III secretion inner membrane protein SctQ  32.14 
 
 		 645 aa  85.9  0.000000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A0636  type III secretion inner membrane protein SctQ  32.14 
 
 		 645 aa  85.9  0.000000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1956  type III secretion inner membrane protein SctQ  32.14 
 
 		 645 aa  85.9  0.000000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1999  type III secretion system apparatus protein YscQ/HrcQ  32.09 
 
 		 359 aa  84  0.000000000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.501081  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1907  type III secretion system apparatus protein YscQ/HrcQ  31.09 
 
 		 359 aa  83.2  0.000000000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0878707  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0429  SctQ  31.12 
 
 		 435 aa  82.8  0.000000000000008  Burkholderia pseudomallei 1710b  Bacteria  normal  0.193635  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2196  type III secretion system apparatus protein YscQ/HrcQ  31.88 
 
 		 436 aa  82.4  0.00000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.583372  n/a   
 
 
-
 
NC_010717  PXO_03405  type III secretion apparatus protein, YscQ/HrcQ family  31.77 
 
 		 273 aa  82  0.00000000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_0450  type III secretion system apparatus protein YscQ/HrcQ  32.98 
 
 		 352 aa  73.9  0.000000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.180414  normal  0.188335 
 
 
-
 
NC_008391  Bamb_4214  type III secretion system apparatus protein YscQ/HrcQ  34.34 
 
 		 381 aa  56.6  0.0000007  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.964929 
 
 
-
 
NC_010086  Bmul_3755  type III secretion system apparatus protein YscQ/HrcQ  38.89 
 
 		 443 aa  56.2  0.0000009  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  decreased coverage  0.00143257 
 
 
-
 
NC_008543  Bcen2424_4839  type III secretion system apparatus protein YscQ/HrcQ  38.89 
 
 		 384 aa  55.1  0.000002  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0073947  decreased coverage  0.0012825 
 
 
-
 
NC_010515  Bcenmc03_5445  type III secretion system apparatus protein YscQ/HrcQ  38.89 
 
 		 384 aa  55.1  0.000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.322534  normal  0.0784231 
 
 
-
 
NC_008061  Bcen_3527  Type III secretion system apparatus protein YscQ/HrcQ  38.89 
 
 		 384 aa  55.1  0.000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.20838  n/a   
 
 
-
 
NC_010552  BamMC406_4736  type III secretion system apparatus protein YscQ/HrcQ  37.5 
 
 		 381 aa  54.7  0.000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.458134  normal  0.482732 
 
 
-
 
NC_011080  SNSL254_A3096  surface presentation of antigens protein SpaO  26.16 
 
 		 303 aa  46.6  0.0006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.614249  hitchhiker  0.00000334679 
 
 
-
 
NC_011083  SeHA_C3081  surface presentation of antigens protein SpaO  26.16 
 
 		 303 aa  47  0.0006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.892748 
 
 
-
 
NC_011149  SeAg_B3013  surface presentation of antigens protein SpaO  26.16 
 
 		 303 aa  46.6  0.0006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A3201  surface presentation of antigens protein SpaO  26.16 
 
 		 303 aa  46.6  0.0006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A3044  surface presentation of antigens protein SpaO  25.58 
 
 		 303 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.118327 
 
 
-
 
NC_008463  PA14_42610  type III secretion system protein  27.07 
 
 		 309 aa  43.9  0.005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.18956  normal  1 
 
 
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