| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3096 |
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| Symbol | epaO |
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| ID | 6485040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3010839 |
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| End bp | 3011750 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642738408 |
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| Product | surface presentation of antigens protein SpaO |
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| Protein accession | YP_002042132 |
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| Protein GI | 194442226 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.614249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00000334679 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATTGC GTGTGAGACA GATTGATCGT CGCGAATGGC TATTGGCGCA AACCGCGACA
GAATGCCAGC GCCATGGCCA GGAAGCGACG CTGGAATATC CGACGCGACA GGGAATGTGG
GTTCGGTTGA GCGATGCAGA AAAACGGTGG TCGGCGTGGA TTCAACCTGG GGACTGGCTT
GAGCATGTCT CTCCCGCTCT GGCGGGGGCG GCGGTTTCTG CTGGCGCTGA GCACCTGGTC
GTTCCCTGGC TTGCTGCGAC AGAGCGACCG TTTGAGTTGC CCGTGCCGCA TTTGTCCTGT
CGGCGTTTAT GCGTAGAGAA CCCCGTGCCG GGAAGCGCGC TGCCGGAAGG GAAATTGTTG
CACATTATGA GCGATCGGGG CGGCCTGTGG TTTGAATATC TTCCTGAACT GCCTGCAGTC
GGGGGCGGCA GGCCGAAAAT GCTGCGTTGG CCGTTGCGCT TTGTAATCGG TAGCAGTGAT
ACGCAGCGTT CGTTGCTGGG CCGAATCGGG ATCGGAGATG TACTCCTGAT TCGTACTTCC
CGTGCGGAAG TTTATTGCTA CGCGAAAAAG TTAGGTCATT TCAACCGTGT TGAAGGGGGA
ATTATTGTGG AAACGTTAGA TATTCAACAT ATCGAAGAAG AAAATAATAC AACTGAAACT
GCAGAAACTC TGCCTGGCTT GAATCAATTG CCCGTCAAAC TGGAATTTGT TTTGTATCGT
AAGAACGTTA CCCTCGCCGA ACTCGAAGCC ATGGGGCAGC AACAGCTATT ATCACTGCCG
ACCAATGCTG AACTTAACGT TGAAATTATG GCGAATGGTG TTTTGCTGGG TAATGGCGAA
CTGGTACAGA TGAATGACAC CTTAGGCGTT GAGATCCATG AATGGCTGAG CGAGTCTGGT
AATGGGGAAT GA
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| Protein sequence | MSLRVRQIDR REWLLAQTAT ECQRHGQEAT LEYPTRQGMW VRLSDAEKRW SAWIQPGDWL
EHVSPALAGA AVSAGAEHLV VPWLAATERP FELPVPHLSC RRLCVENPVP GSALPEGKLL
HIMSDRGGLW FEYLPELPAV GGGRPKMLRW PLRFVIGSSD TQRSLLGRIG IGDVLLIRTS
RAEVYCYAKK LGHFNRVEGG IIVETLDIQH IEEENNTTET AETLPGLNQL PVKLEFVLYR
KNVTLAELEA MGQQQLLSLP TNAELNVEIM ANGVLLGNGE LVQMNDTLGV EIHEWLSESG
NGE
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