| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1907 |
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| Symbol | |
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| ID | 4903516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1870646 |
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| End bp | 1871725 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640145013 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_001075941 |
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| Protein GI | 126457706 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0878707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCGACG CCCGCCTTGA GGCACTCGCC GCATCCGTGT CCGGCCTCGC GTCGTGGCAT
GTTTCGGTGG TCGACAATGC GCATGTTTTC ATCGATCGCC TCGTCGACGC GGCGGTGATT
GAACTGTCGA TCGGGCCGTC GGGAGGAATG GGCGGATTTC CCTTGTTCAT CGCGATCGAT
CTCGACGCAC ACCCCGATCT CGGCATCGCT GCCTACCCCG AGCGTGACGC CGTGTGCGCA
CACCGCGAGG CATCCGAGTC AGTCGCGCTC AGACAAGCCG TCTCCGGCAT CTTGCTCGAA
CCGCTCGTCA AGTGTCTCGA TCGTTTCGGA CTCTGCTCGC CGAGCGTCGT CTCGATCACG
CGGCCGCGCC CCGTCGATCG CGCCGGCGAC TGGCGCGACC AAGCCGCAGT CGAACTGACG
CTGGCGCTCG ATGAGCGCCG CGTCGCCTGC GCGATCAGCC TGCCGATGCG GGGCTACGAC
ATCGTCGACG CGCTGCTGCG CACGCAACCC ACGCCTCGCA AGCCGGCCAT GTCGATACCG
GGTGCGCTGA TCATCGGCGC GCGGCCGCTG GCGGTCGACA CGCTCAACGT CCTGGAAGCC
GGCGATGTCC TGTTACGAGG CCTCTTTCCA CACTTCAACG CGACACTGCT CTCGACGGGC
ACGCGCGCCA CCGAATCCCT GCGTGCCGTG GCGGCATGGG GCGCGCGAGG ACACGTGCGC
CTTCACGCAG CAGTACAAGT CGACGTTCGA TCGTTCGTCA TCTCCAAGGA GCTTTCCATG
TCGGAAGAAG TAGACCAGGC AAGTGCCGGC CTCGGCGTCG TCACAACCGA CGAACCCACC
CGGATCGGCG AACTCGAACT CCCCGTGCAG TTCGAAATCG ACACCGTTTC GCTGCCCATC
GATCAGTTGT CGGCGCTCGA ACCCGGCTAT GTCATCGAGC TCCCGGTCGC GGTGACGGAC
GCGCGGTTGC GGCTCGTCGT CCATGGTCAG ACCGTCGGCT ATGGGGAGCT CGTGGCTGTC
GGCGAGCATC TCGGCGTTCG CATCATTCGA ATGGCTCATC GACATGGTAC AGTTCAGTGA
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| Protein sequence | MFDARLEALA ASVSGLASWH VSVVDNAHVF IDRLVDAAVI ELSIGPSGGM GGFPLFIAID
LDAHPDLGIA AYPERDAVCA HREASESVAL RQAVSGILLE PLVKCLDRFG LCSPSVVSIT
RPRPVDRAGD WRDQAAVELT LALDERRVAC AISLPMRGYD IVDALLRTQP TPRKPAMSIP
GALIIGARPL AVDTLNVLEA GDVLLRGLFP HFNATLLSTG TRATESLRAV AAWGARGHVR
LHAAVQVDVR SFVISKELSM SEEVDQASAG LGVVTTDEPT RIGELELPVQ FEIDTVSLPI
DQLSALEPGY VIELPVAVTD ARLRLVVHGQ TVGYGELVAV GEHLGVRIIR MAHRHGTVQ
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