Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2279 |
Symbol | |
ID | 4888259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 2206172 |
End bp | 2207446 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640132216 |
Product | type III secretion system apparatus protein YscQ/HrcQ |
Protein accession | YP_001063273 |
Protein GI | 126442961 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCG AGCCGATCGA ACTGGAACCC GCTACCGCCG AGCCGCCCGG CATCGACACC GCGCTGCCGC TGCCCGCGTG CAGCGCGTTC GACGCGGCGC TCGCGCGCAT CGTCTGCGAC GCGCGGCTCG CCGCCTGGCT CGCGCGCTTT CCGGGGCTGT CCGACTGGCG CGCGTCGGCG GGCGAGCGGC CGTGCTTCGA GCGCCCCGGC GTGCTCGAGC TGCGGCGCGG CGGCGCGGCC GCGCACGTCG CGATCGATCT CGCGGCGTTT CCGGCGCTCG AGGTCGTCGC CGCGCCCGCG CTCGACGCGC GCGGCGACGC GAGCCTCTCG CTGCGCGCGG CGCTCGCGGC GACGCTGCTC GCGCCGCTCG TCGCCGCGTT CGCGGCGGCG GGGCTCGACG GCGTGACGGT CGGCGCGCTG CGCGCGGTGC CCGCCGCGGC GCTCGACGCG ACGCGCTGCA TGCTGTCGTT CGCGCTCGAC GGCGCGCCGC TGCGCTGCGC GCTGCTCGAT GCGCAAGCGC CGTGGCTCGA CGCGCTCGCG GCCCGGCTGC ACGACGAGCG GCGCCGCGAT GCGGCAAGCG GGCTCGCCCG CGTGCGCTTG CCGGGGCGCG TGCGGCTCGG CACGCGCGCG CTGCCGCTCG CGGTGCTGCG CAGCCTGCGG CCGGGCGACG TGCTGCTCGA CATGGTGCCC GCCGCACTGG GCGCCGCGCG GGCGGGCCCG CTGCATGCGT GGTGGGGCGC GCGGCGCGCG GCCCAATGGC ACGCAACCGT TCTGATCGAG GGAACCACGA TGACGATGAC CGAAATGCCA GACACCGCCG ACGACCTCGA CGAGCCGATC GTCGCGGGCG ACTTGCCGGC CGATTCCTTG GCCGATTCCT TGGCCGATTT TCCGGCCGAT TCCCCGGCTG AATTTCCGGC CGACCGGGCG GGCGATCTGC CGGCCGATTC CGCGGCTCAT TCGTCGCCCG GTTCGCTCGC CGGGTTGCCG GCCGACGCGC CGCCGCGCGA CGCGCGGTAC GCCGCGCCCG AGCCGGCCGA TCTCGGCGAG GTCGCGCTGC CCGTGCACGT CGAGATCGAC ACGCTGTCGC TGTCGATCGC CGAGCTCGCC GCGCTGCGCC CGGGCTACGT GCTCGAGTTG CCGCTCGCCG CGCGCGACGT GCCGGTGCGG CTCGTCGCAT ACGGCCAGGC GATCGGCGGC GGCCGCCTCG TCGCGGTGGG CGCGCATCTC GGCGTGCGGA TCGACCGGAT GGCGGGCGAC GATGGTTCAG TTTAA
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Protein sequence | MNTEPIELEP ATAEPPGIDT ALPLPACSAF DAALARIVCD ARLAAWLARF PGLSDWRASA GERPCFERPG VLELRRGGAA AHVAIDLAAF PALEVVAAPA LDARGDASLS LRAALAATLL APLVAAFAAA GLDGVTVGAL RAVPAAALDA TRCMLSFALD GAPLRCALLD AQAPWLDALA ARLHDERRRD AASGLARVRL PGRVRLGTRA LPLAVLRSLR PGDVLLDMVP AALGAARAGP LHAWWGARRA AQWHATVLIE GTTMTMTEMP DTADDLDEPI VAGDLPADSL ADSLADFPAD SPAEFPADRA GDLPADSAAH SSPGSLAGLP ADAPPRDARY AAPEPADLGE VALPVHVEID TLSLSIAELA ALRPGYVLEL PLAARDVPVR LVAYGQAIGG GRLVAVGAHL GVRIDRMAGD DGSV
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