| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5860 |
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| Symbol | |
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| ID | 4314766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 337466 |
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| End bp | 338446 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153701 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_777740 |
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| Protein GI | 115360603 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCGC TTCTCACGCA CACGCTCGGC GTCTCTGCGT TCGGCGTCGG CGCGCGCGAT
CTCGTGGACC CGGCGCGCGC CGCCATCGTG CGCTTGCGCT GGGGCATCGA AATGGCAGCG
GTGCGCATCG ACGTCGGACA GCACGCGGGG CTCGCGAGCG TGGTCGCATC GGACGAGCCC
GCCAACGAGC CGCTGCGCCA GGCCGTGTGC GCCATTCTGC TCGAGCCGGT GCGACGCGCG
CTGCAGGCGC TCGGGTTCGA CGGCGTGGAA GTGCTCTCGC TCGAACGCGC CGCGCCGCAG
ACGCTGCGTG CGCCTTGCTG CGCGTTCACG TTCCGTGTGG GCGACGCACG CTTCGACGCA
GCCATCGAGC ATATCGACGG TGGCTGGCTC GACGCACTCG AGTCACTCGT GGCCCGCCAA
TGTACGCCGT TCGCCACGCA CGTCAGCGAG ATCGCCGTGC CCGGCCGGCT GCAGATCGGC
GAGAAAACGA TGAACGTGAC GACGCTCGAT TCGCTGCGCA CGGGGGACGT CATCTTGCGT
GTCGTACCCG AAGCCACCCG CGCGCTCTTC GCGAGCGCGC GCCCATCCGC CCCGATGCAA
GTTGTCTGGG GCCGCTACGG GACGCGGCAA CTGCGCGCCG TGGCAGACGT CACCCACCAT
CTGATGACCT TGAGCGAGGA CCCCACCATG AGCCATGACA CGCAGTTCAA CGCGCCGCTT
ACCGATTCGA TCGACACGCC CGTCGAAATC AGCCAGCTGG ACCTGCCGCT GAAGCTCGAG
ATCGACACGG TTTCGATGCC GGTTGCCCAG CTCTCGGCGC TGCGCGCGGG CTACGTGCTC
GAGCTTCCCA CCGCGCTGCC CGATGCGCGC GTGCGGCTCG TCACCTACGG GCAGACGATC
GGCTTCGGCG AACTCGTGAG CGTCGGCGAT CATCTCGGCG TGCGTCTCGT TCAGCTGTCG
CGCGGCCATG GTTCAGTTTA G
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| Protein sequence | MSALLTHTLG VSAFGVGARD LVDPARAAIV RLRWGIEMAA VRIDVGQHAG LASVVASDEP
ANEPLRQAVC AILLEPVRRA LQALGFDGVE VLSLERAAPQ TLRAPCCAFT FRVGDARFDA
AIEHIDGGWL DALESLVARQ CTPFATHVSE IAVPGRLQIG EKTMNVTTLD SLRTGDVILR
VVPEATRALF ASARPSAPMQ VVWGRYGTRQ LRAVADVTHH LMTLSEDPTM SHDTQFNAPL
TDSIDTPVEI SQLDLPLKLE IDTVSMPVAQ LSALRAGYVL ELPTALPDAR VRLVTYGQTI
GFGELVSVGD HLGVRLVQLS RGHGSV
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