| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0861 |
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| Symbol | hrcQ |
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| ID | 1223168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1087964 |
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| End bp | 1089028 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637240721 |
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| Product | Hrp conserved protein HRCQ |
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| Protein accession | NP_522422 |
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| Protein GI | 17549082 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0266319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG GGCCTTCTTT CTCTGCGCTG GAACCCCACC TGCGCGCCTT CACGCCGGCA
CACGCCGCGC TTACGCGCCT GCTGGACGGT GTGCATCGCG GCGGCGACTC GGACGACTGG
CAACTGCATC TCGCGCGGAC GCCGTTGGCG GCGAGCGCGC CGCTCACGCT GGCGATCCAG
TCGGCGCAGT GCCGCGCTGA ACTCCTCATC GACGGCGCCC ACTACCCCGC GCTGCACGCC
ATCGCCCGCG AAACCGACCG CCCGCGCCGC CTCGCGCTCG GGAATCTGTG GCTCGCGCCG
GTGCTGCATG CGCTGGAAGA CGCGGGCCTG GGTGAGACGC AGCTGACCAA CCTGCGCCGC
CTGAAAGCCG ACGCCGTGCA CACCTCGGGC CCCGTGCTGC CGCTGCAGAT CGCCAGCGCC
GCCCACGCAT GCCGCTGCGA CATCCACGCG CTGGACTGGC ACGGCGTGCC GCCCGCGCCG
CCGGCCGCCG ACCCGGACAC CATCCTGCAC CGGTTCGGCG CGCTGGCCCT GCCCGGCCGG
CTGCGCGTGG CCAGCCGGCG CTGCCGGCGC GGCCTGCTCG ACACGCTGGC GCCCGGCGAC
ATCCTGCTCG GCTGGAACGA CGCCACCTAC CGGCCCGCCG CCGACGAAGG CACGGTCCAC
CTCGCCTGGG GCGATGCCCG CCAGCCGCAC CTCACCGCCA CTGCCCATTA CAAGGACGGA
ATCGTGACCA CACTCGACCT GCATCCGCTC ACCGACGACG ACGACGCGTA CCCGCACGAC
TTCGCCGCCC CGCGCACGCC GGCCGGCAGC AGCGCCGGCC AGGGCGTTCC CCTCGAGCAG
CTGGAGGTGC CGGTGCACCT GGAGCTGGCC GTGATGGGCA TGCCGCTGGC CGAACTCGCC
GCGCTGCAGC CGCAGCACGT GCTGACGCTG CCGGTGAAGA TCCGCGACGT CAGCGTGCGG
CTGGTCTGCC ACGGGCAGAC CCTGGGGCAC GGCCAGCTGG TGGCCGTGGG CGAGCAGCTC
GGCCTGCAGA TTGCATCCAT CGGCAAGCAC CATGCAGAAC GTTGA
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| Protein sequence | MNAGPSFSAL EPHLRAFTPA HAALTRLLDG VHRGGDSDDW QLHLARTPLA ASAPLTLAIQ
SAQCRAELLI DGAHYPALHA IARETDRPRR LALGNLWLAP VLHALEDAGL GETQLTNLRR
LKADAVHTSG PVLPLQIASA AHACRCDIHA LDWHGVPPAP PAADPDTILH RFGALALPGR
LRVASRRCRR GLLDTLAPGD ILLGWNDATY RPAADEGTVH LAWGDARQPH LTATAHYKDG
IVTTLDLHPL TDDDDAYPHD FAAPRTPAGS SAGQGVPLEQ LEVPVHLELA VMGMPLAELA
ALQPQHVLTL PVKIRDVSVR LVCHGQTLGH GQLVAVGEQL GLQIASIGKH HAER
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