| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2080 |
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| Symbol | |
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| ID | 4903332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2043365 |
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| End bp | 2044336 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640145185 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_001076113 |
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| Protein GI | 126458287 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.355086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC GCTATACGTT GTTCAGGCGC GTCGCGCCCG CGGAATTGCC GCTGTACCGC
CGTGCGCGGG CGCTGCGCGC GGCGGGCGAG CACGCCGCGC TGCGCACGAT CGCGCCGCCG
CGCGGCTATG CGGCGCTGCG CGCGACGTGG CGGGGCGTCG AGCACGACGG TTGGGTCGAC
CTCGACGATC TGATGCGCCG CCGCTACCCG GCGCTCGGCG CGCTCGCGTG GCGCGCGCTC
GACAGGCGCT ACGCGCTCGA TTTGCTGAGC GGGCGGGACG CGGCGGCCGA GCTGCCCGCG
CCGCCCGGCG GCTGGGCGCA TGTGCGGCTC GTCGATCTCG TCGAGCGCGC GCTGCCCGCC
GAGCCGCTGC TGTGTTTCGA CACCCCGGGC CGCGCGCGTG CGCTGTTCCG CGCGTTCCCG
GACGAAGCGC CCGCGGCGCG CGCCGTGGCC GACATCGGCG GCGTGCCGCT CACGATGCGC
TTCGCGATCG GCACCGCGCG CCTGCCGCTC GCGCTGTTGC CCGCCGTCGC GCCGGGCGAC
GTGCTGCTCG TATGCGCGCC GCGCAACGTG GTCCGCATCG GGGCGCGCGC ACTGTGTGAA
TTTTGCTGCG AAGGAGAAAA CATCATGCTG AACGAACCCC TGGCCGACTC CGCGATCGAC
GCCCTGCACG ACGCATCGCA CGACGCATCG CACGACGAAC CGACGGCGGC GCACGCGCCG
CCGGCTTTCG ACATCGATGC GCTGCCCGTC ACGCTGGAGT TCGTGCTGCA CGACGAACGC
GTGACGGTCG CGCAGCTCGC GGGCTGCCAC CCGGGCATGG TGCTGCCGCT GCGCGGTGCG
CCGGGCGAGG TGACGATCCG CGCGAACGGC CAGCCGTTCG GCCGCGGCGA GCTGATCCAG
GTCGGCGAGC AGCTCGCGGT CGAGGTGAAG GCGCTCTGGC GCGCGAAGCC GGCGGCGTGC
GATGGCGAAT AA
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| Protein sequence | MSARYTLFRR VAPAELPLYR RARALRAAGE HAALRTIAPP RGYAALRATW RGVEHDGWVD
LDDLMRRRYP ALGALAWRAL DRRYALDLLS GRDAAAELPA PPGGWAHVRL VDLVERALPA
EPLLCFDTPG RARALFRAFP DEAPAARAVA DIGGVPLTMR FAIGTARLPL ALLPAVAPGD
VLLVCAPRNV VRIGARALCE FCCEGENIML NEPLADSAID ALHDASHDAS HDEPTAAHAP
PAFDIDALPV TLEFVLHDER VTVAQLAGCH PGMVLPLRGA PGEVTIRANG QPFGRGELIQ
VGEQLAVEVK ALWRAKPAAC DGE
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