More than 300 homologs were found in PanDaTox collection
for query gene Nther_2142 on replicon NC_010718
Organism: Natranaerobius thermophilus JW/NM-WN-LF



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010718  Nther_2142  two component transcriptional regulator, LytTR family  100 
 
 
238 aa  476  1e-133  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1924  two component transcriptional regulator, LytTR family  48.09 
 
 
250 aa  219  1.9999999999999999e-56  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2766  two component transcriptional regulator, LytTR family  37.18 
 
 
241 aa  170  2e-41  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2400  response regulator receiver protein  34.87 
 
 
236 aa  147  2.0000000000000003e-34  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.14107  n/a   
 
 
-
 
NC_010718  Nther_1569  two component transcriptional regulator, LytTR family  30.83 
 
 
240 aa  115  6.9999999999999995e-25  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00000000000000531282 
 
 
-
 
NC_013216  Dtox_0388  two component transcriptional regulator, LytTR family  29.88 
 
 
233 aa  113  3e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0399  two component transcriptional regulator, LytTR family  29.05 
 
 
242 aa  112  6e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2697  LytR/AlgR family transcriptional regulator  29.15 
 
 
240 aa  101  1e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1323  two component transcriptional regulator, LytTR family  28.63 
 
 
237 aa  100  2e-20  Atopobium parvulum DSM 20469  Bacteria  normal  0.0540721  normal  0.0273831 
 
 
-
 
NC_007644  Moth_1621  LytR/AlgR family transcriptional regulator  28.1 
 
 
245 aa  99.4  4e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_00400  response regulator of the LytR/AlgR family  29.88 
 
 
237 aa  95.5  6e-19  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.132657  normal 
 
 
-
 
NC_007947  Mfla_0036  LytR/AlgR family transcriptional regulator  27.82 
 
 
248 aa  95.5  6e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0137  two component transcriptional regulator, LytTR family  28.75 
 
 
237 aa  93.2  3e-18  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_10420  two component transcriptional regulator, LytTR family  30.43 
 
 
253 aa  93.2  3e-18  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000460621  n/a   
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  33.49 
 
 
244 aa  93.6  3e-18  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal 
 
 
-
 
NC_009674  Bcer98_3958  LytTR family two component transcriptional regulator  29.72 
 
 
246 aa  92.4  6e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1869  two component transcriptional regulator, LytTR family  32.49 
 
 
243 aa  92  8e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000208305  normal  0.145854 
 
 
-
 
NC_011830  Dhaf_3686  two component transcriptional regulator, LytTR family  27.76 
 
 
251 aa  90.5  2e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2629  response regulator receiver protein  41.03 
 
 
130 aa  90.1  3e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4495  LytTR family two component transcriptional regulator  25.89 
 
 
245 aa  89.7  4e-17  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.17015 
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  29.23 
 
 
260 aa  89  5e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal 
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  30.04 
 
 
252 aa  89  6e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  28.69 
 
 
251 aa  88.2  9e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  27.76 
 
 
243 aa  87.8  1e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3668  two-component response regulator AlgR  30.52 
 
 
243 aa  87.8  1e-16  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00827536  normal  0.334671 
 
 
-
 
NC_007948  Bpro_3670  LytR/AlgR family transcriptional regulator  25.1 
 
 
246 aa  86.7  3e-16  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01160  response regulator of the LytR/AlgR family  27.5 
 
 
238 aa  86.7  3e-16  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  28.07 
 
 
253 aa  86.3  4e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal 
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  30.89 
 
 
238 aa  86.3  4e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3149  putative two-component response-regulatory protein YehT  30.49 
 
 
238 aa  85.9  5e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  30.08 
 
 
238 aa  85.9  5e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2957  response regulator receiver protein  28.5 
 
 
236 aa  85.9  5e-16  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00954821  n/a   
 
 
-
 
NC_010424  Daud_0119  response regulator receiver protein  28.92 
 
 
249 aa  85.9  5e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  30.08 
 
 
238 aa  85.9  5e-16  Yersinia pestis Angola  Bacteria  normal  normal  0.159726 
 
 
-
 
NC_010506  Swoo_1765  putative two-component response-regulatory protein YehT  29.52 
 
 
232 aa  85.9  6e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  0.199181  hitchhiker  0.00544661 
 
 
-
 
NC_013037  Dfer_0148  two component transcriptional regulator, LytTR family  28.7 
 
 
251 aa  85.5  7e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.48043 
 
 
-
 
NC_013132  Cpin_6623  two component transcriptional regulator, LytTR family  26.24 
 
 
258 aa  85.5  7e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0991065  normal  0.080317 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  31.05 
 
 
238 aa  85.1  8e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  32.74 
 
 
257 aa  84.7  0.000000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3968  LytTR family two component transcriptional regulator  31.07 
 
 
229 aa  84.7  0.000000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0978404  n/a   
 
 
-
 
NC_010718  Nther_2621  response regulator receiver and SARP domain protein  37.9 
 
 
131 aa  84.7  0.000000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1502  two component transcriptional regulator, LytTR family  30.49 
 
 
254 aa  84  0.000000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.192215 
 
 
-
 
NC_010814  Glov_3544  two component transcriptional regulator, LytTR family  26 
 
 
251 aa  84.3  0.000000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.0394969  n/a   
 
 
-
 
NC_011725  BCB4264_A5565  response regulator LytR  30 
 
 
246 aa  84.3  0.000000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5384  response regulator LytR  32 
 
 
246 aa  83.6  0.000000000000002  Bacillus cereus G9842  Bacteria  normal  0.662493  normal  0.485514 
 
 
-
 
NC_008825  Mpe_A1113  LytR/AlgR family transcriptional regulator  24.81 
 
 
256 aa  84  0.000000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.45992  normal  0.29087 
 
 
-
 
NC_009654  Mmwyl1_3341  putative two-component response-regulatory protein YehT  26.32 
 
 
244 aa  82.8  0.000000000000004  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.798853 
 
 
-
 
NC_008321  Shewmr4_2432  putative two-component response-regulatory protein YehT  26.54 
 
 
236 aa  82.8  0.000000000000004  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000158974  hitchhiker  0.00361478 
 
 
-
 
NC_009665  Shew185_1658  putative two-component response-regulatory protein YehT  27.23 
 
 
236 aa  82.8  0.000000000000005  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000153786  n/a   
 
 
-
 
NC_011663  Sbal223_2685  putative two-component response-regulatory protein YehT  27.23 
 
 
236 aa  82.8  0.000000000000005  Shewanella baltica OS223  Bacteria  normal  0.0538398  hitchhiker  0.000367908 
 
 
-
 
NC_008322  Shewmr7_2502  putative two-component response-regulatory protein YehT  26.54 
 
 
236 aa  82.4  0.000000000000005  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00178929  normal  0.0452702 
 
 
-
 
NC_009997  Sbal195_1695  putative two-component response-regulatory protein YehT  27.23 
 
 
236 aa  82.8  0.000000000000005  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal 
 
 
-
 
NC_013159  Svir_00870  response regulator of the LytR/AlgR family  27 
 
 
272 aa  82.4  0.000000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1673  putative two-component response-regulatory protein YehT  27.23 
 
 
236 aa  82.8  0.000000000000005  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000537167  n/a   
 
 
-
 
NC_003909  BCE_5573  response regulator LytR  30.67 
 
 
246 aa  82.4  0.000000000000006  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  25.69 
 
 
246 aa  82.4  0.000000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  27.9 
 
 
237 aa  82.4  0.000000000000006  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5295  response regulator LytR  30.97 
 
 
246 aa  82  0.000000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5122  response regulator  30.97 
 
 
246 aa  82  0.000000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5691  response regulator LytR  30.97 
 
 
246 aa  82  0.000000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0097  LytR/AlgR family transcriptional regulator  27.42 
 
 
245 aa  82  0.000000000000007  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5536  response regulator LytR  30.97 
 
 
246 aa  82  0.000000000000007  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008577  Shewana3_2594  putative two-component response-regulatory protein YehT  26.54 
 
 
236 aa  82  0.000000000000007  Shewanella sp. ANA-3  Bacteria  normal  0.0103906  hitchhiker  0.00157605 
 
 
-
 
NC_003910  CPS_2278  LytTr DNA-binding response regulator  27.02 
 
 
280 aa  82  0.000000000000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.421967  n/a   
 
 
-
 
NC_006274  BCZK5137  response regulator  30.67 
 
 
246 aa  82  0.000000000000008  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2791  LytTR family two component transcriptional regulator  26.32 
 
 
250 aa  81.6  0.000000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  0.073585  n/a   
 
 
-
 
NC_010513  Xfasm12_1259  response regulator receiver protein  27.24 
 
 
252 aa  82  0.000000000000008  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4010  two component transcriptional regulator, LytTR family  29.72 
 
 
231 aa  81.6  0.000000000000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0569074  decreased coverage  0.00157623 
 
 
-
 
NC_010571  Oter_2328  LytTR family two component transcriptional regulator  24.9 
 
 
255 aa  81.3  0.00000000000001  Opitutus terrae PB90-1  Bacteria  normal  0.261765  decreased coverage  0.00199939 
 
 
-
 
NC_011658  BCAH187_A5621  response regulator LytR  30.22 
 
 
246 aa  81.3  0.00000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4801  two component transcriptional regulator, LytTR family  27.71 
 
 
240 aa  81.3  0.00000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.154299  normal 
 
 
-
 
NC_009438  Sputcn32_1548  putative two-component response-regulatory protein YehT  26.07 
 
 
236 aa  81.6  0.00000000000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.496368  n/a   
 
 
-
 
NC_007912  Sde_3733  response regulator receiver domain-containing protein  27.24 
 
 
249 aa  80.5  0.00000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.766169 
 
 
-
 
NC_010320  Teth514_0498  LytTR family two component transcriptional regulator  28.86 
 
 
236 aa  80.9  0.00000000000002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00022884  n/a   
 
 
-
 
NC_010577  XfasM23_1226  LytTR family two component transcriptional regulator  27.24 
 
 
252 aa  80.5  0.00000000000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0421  two component transcriptional regulator, LytTR family  30.57 
 
 
256 aa  80.5  0.00000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.268274 
 
 
-
 
NC_009092  Shew_2329  putative two-component response-regulatory protein YehT  25.82 
 
 
236 aa  79.7  0.00000000000003  Shewanella loihica PV-4  Bacteria  normal  0.0108361  normal  0.9097 
 
 
-
 
NC_007575  Suden_0935  LytR/AlgR family transcriptional regulator  31.44 
 
 
232 aa  79.7  0.00000000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  27.59 
 
 
243 aa  79.3  0.00000000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.000000000586434 
 
 
-
 
NC_008346  Swol_0444  response regulator receiver protein  26.87 
 
 
262 aa  79.3  0.00000000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  28.03 
 
 
266 aa  79.7  0.00000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0114  LytTR family two component transcriptional regulator  29.8 
 
 
226 aa  79.3  0.00000000000005  Thermosipho melanesiensis BI429  Bacteria  normal  0.310837  n/a   
 
 
-
 
NC_009831  Ssed_2883  putative two-component response-regulatory protein YehT  26.67 
 
 
236 aa  79.3  0.00000000000005  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000903631  unclonable  0.0000000000401288 
 
 
-
 
NC_011830  Dhaf_1994  two component transcriptional regulator, LytTR family  30.05 
 
 
236 aa  79  0.00000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  30.12 
 
 
239 aa  79  0.00000000000006  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5234  LytTR family two component transcriptional regulator  29.15 
 
 
246 aa  79  0.00000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2791  two component transcriptional regulator, LytTR family  29.52 
 
 
224 aa  78.6  0.00000000000007  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0891261 
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  25.64 
 
 
275 aa  78.6  0.00000000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  28.93 
 
 
248 aa  78.6  0.00000000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  28.51 
 
 
248 aa  78.6  0.00000000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal 
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  26.23 
 
 
248 aa  78.6  0.00000000000008  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5645  two component transcriptional regulator, LytTR family  28.7 
 
 
248 aa  78.6  0.00000000000009  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.954414  normal  0.925082 
 
 
-
 
NC_013501  Rmar_2186  two component transcriptional regulator, LytTR family  27.7 
 
 
275 aa  78.6  0.00000000000009  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3531  two component transcriptional regulator, LytTR family  26.12 
 
 
243 aa  78.6  0.00000000000009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3930  LytTR family two component transcriptional regulator  29.87 
 
 
238 aa  77.8  0.0000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3200  two component transcriptional regulator, LytTR family  23.6 
 
 
256 aa  77.8  0.0000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00000259787 
 
 
-
 
NC_008751  Dvul_2356  response regulator receiver protein  23.17 
 
 
257 aa  78.2  0.0000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.325932  normal  0.149931 
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  25.49 
 
 
248 aa  77.4  0.0000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1393  two component transcriptional regulator, LytTR family  27.64 
 
 
238 aa  77.4  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000000160197 
 
 
-
 
NC_008782  Ajs_3314  LytR/AlgR family transcriptional regulator  27.11 
 
 
250 aa  77.8  0.0000000000002  Acidovorax sp. JS42  Bacteria  normal  0.742064  normal  0.13531 
 
 
-
 
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